Gene Sama_2366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2366 
Symbol 
ID4604615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2843218 
End bp2844240 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content55% 
IMG OID639781763 
Producthypothetical protein 
Protein accessionYP_928240 
Protein GI119775500 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000180475 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.579139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG AATTAACGCC TTCTTCCGAA GAGCAGGAAG CGCCAGCGAC AGAATCGTTG 
GGGCAAATCC TCAAGGCCGC CCGCGAAGCC AAGGGGATGT CGGTCGCCGA TGTGGCGACT
GCGTTGCATT TGCGGCCCTC CGTTGTAAAA GATCTCGAAG CCGACGACTT CAGCAATATC
TCATCAGCCA CTTATATCCG CGGATACATC AAAAACTTTG CCCGCATTGT TGAAGCCGAT
AAGCAGAAGG TGGAGGCCTG TCTGGCAAGC CAGGTACCCG GTGTCAGCCA ACCGGCCATG
CAAAGCTTTT CCAGAAAAAC CGTGCGTCAG GCCAGAGATA AGCGCTACCT GATGCTCACC
TATCTGGTGA TCCTCATCCT GGTTGCCTTA TTGGTATTCT GGTGGCTACA AACCAGTAAG
TTTTTTAATA CCGCTGCCGT CGATTTCTCC AAGCCCACAG CCGAAGAAGT AGCGGCCGCC
GGACAAACCT CTATTCAGGA TGACCTGATG CAGCGACTGG GCAATGAGAC CCACACGCAA
GCAGGTACCT CCCCGCAGCC AGACACTGAG GCGGCTTATG AGCAGTCTGT AAATAGTGAT
GATATGCCGG TTGCCGCGCA AGAGGTCACA GTGGGCAGCG CTGAAGAGCC TTCGGCGCAG
CAGGACAACA ATTCTGCCGT CGACACCACC GCCTCTGATA TGAGAGAAAT TGACACCAGA
GCAAGCAACG CAGAAGCTAC ACCAGAGGTT ACTGCCAGTA TTCCGGCCAC ACCAGGACAG
TCTGCTCTGG TCATGTCCTT CAGTGCCGAC TGCTGGGTTC AGGTAAAGGA TGCCACAGGT
AAGGTACTTG TCAGTGATCT GCGTAAGGCC GGTCAGACCA TCAACCTCAG TGGCAAGGCG
CCTTTCAGCT TTATTCTCGG CGCCCCCCAG GCTGTTAAGC TCAGTATCAA TGGTGAGGCC
GCGAGTCTCG ACGAGTTCCC CAAGGGCCGG GTGGCCAGAT TCAGTCTGCC CAAAAACGGT
TAA
 
Protein sequence
MNEELTPSSE EQEAPATESL GQILKAAREA KGMSVADVAT ALHLRPSVVK DLEADDFSNI 
SSATYIRGYI KNFARIVEAD KQKVEACLAS QVPGVSQPAM QSFSRKTVRQ ARDKRYLMLT
YLVILILVAL LVFWWLQTSK FFNTAAVDFS KPTAEEVAAA GQTSIQDDLM QRLGNETHTQ
AGTSPQPDTE AAYEQSVNSD DMPVAAQEVT VGSAEEPSAQ QDNNSAVDTT ASDMREIDTR
ASNAEATPEV TASIPATPGQ SALVMSFSAD CWVQVKDATG KVLVSDLRKA GQTINLSGKA
PFSFILGAPQ AVKLSINGEA ASLDEFPKGR VARFSLPKNG