| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2362 |
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| Symbol | |
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| ID | 4604611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2838800 |
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| End bp | 2839987 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781759 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_928236 |
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| Protein GI | 119775496 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.034876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.596671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAGAA TTTGCTGGCT GCTGGCCTGA GTTTGGCCGT GCTGTCAGCC
TGCTCCTCCA ATGACGTGGA AGAAGACCCC GTCAGCGAAC TCAAGGAGCT TAACGCGACC
GTTTTCCCGG AAATCAACTG GAGCGCCAGT GTGGGTAGCG GTGTAGGCGA TTATTACTCA
CGTCTGCGAC CTGCAGTGGA ATACGGCAAG ATATTTGCCG CCGACCGTGA CGGTTTGGTC
GTTGCGTTCG ATGAAACCAG TGGTGAAAAG CTGTGGGAAG TCGATTTCAG TGATTTGTTC
AAAGACAGAT TGCTGGGCAA AAACAAAGGC GCCCGTCTTG CTTCTGGCAT GACAGCGGCT
CGCGGCAAGG TGTTTGTGGG TGGTGAGAGT GGTCTGTTGG CTGCTCTGGA TGCCGAAACC
GGCGCCGTGG TATGGAGCGT TCAGGCATCG GGCGAATTGC TGTCTGCACC GACCGTGGGT
GAAAACACCG TGGTGGTAAA CGCCAGCTCA GGTTCATTGG ATGCCTTTGA CGTAGATACC
GGCGAAAAAC GTTGGAGCTA CGAAAACGCA CTGCCCAACC TGACCCTGCG TGGTACCGGT
GCCGCAGCCT TTATGGCCGG TGGTTTCTTT GTGGGTACCG CCGATGGCAA GGTTGCCGTG
GTGGTGAAAG ATAATGGTCA ACCTGCGTGG GAGCAGCCCA TTTACACCCC CAAGGGTGGT
AATGAGTTCA GCCGTATGGC CGACGTTGAC ATGACGCCAC TGCCTGTGGG TGACAACCTG
TACGCTGTGA GCTACAACGG TAATCTGGTC TCCATGGAAA TGCGCTCCGG TCGTGTTCTC
TGGACCCGTA AGTATTCCAG CTTCAACGAG CTGGCCGCCA GCGGTGTGCA GTTGTATCTG
GTTGCAGACA GTAGCCGTAT TTATGCACTT GACCGTCGCA ACGGTCTGGA GCTGTGGAGC
AATTCCGAGC TGGCCAACCG TGAACTGACT TCACCCGTGG TGTTTGATAA CTACCTGGTA
GTGGGTGATT TCGAAGGTTA TCTGCACTTT ATCGACCGTA ACGATGGCAG CATCGTCGGC
CGCATCGAAG TCGACAGCGA CGGCCTTTAC AGCCAGCCGC TGGTCGTCGA TGGTAAGATA
TACGTGCAGG GCCGCAGCGG CAAAGTGGCC CGCATCGCAC TTCCTTAA
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| Protein sequence | MKSWCKNLLA AGLSLAVLSA CSSNDVEEDP VSELKELNAT VFPEINWSAS VGSGVGDYYS
RLRPAVEYGK IFAADRDGLV VAFDETSGEK LWEVDFSDLF KDRLLGKNKG ARLASGMTAA
RGKVFVGGES GLLAALDAET GAVVWSVQAS GELLSAPTVG ENTVVVNASS GSLDAFDVDT
GEKRWSYENA LPNLTLRGTG AAAFMAGGFF VGTADGKVAV VVKDNGQPAW EQPIYTPKGG
NEFSRMADVD MTPLPVGDNL YAVSYNGNLV SMEMRSGRVL WTRKYSSFNE LAASGVQLYL
VADSSRIYAL DRRNGLELWS NSELANRELT SPVVFDNYLV VGDFEGYLHF IDRNDGSIVG
RIEVDSDGLY SQPLVVDGKI YVQGRSGKVA RIALP
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