| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2360 |
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| Symbol | xseA |
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| ID | 4604609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2835793 |
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| End bp | 2837136 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781757 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_928234 |
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| Protein GI | 119775494 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.203365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.598645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCC CTAAAAATGA TGTTTATACC GTGTCCCGCC TCAACGGCGA AGTACGGCAA
CTTCTGGAGG GACAGTTGGG GCGGATTTGG CTGACCGGCG AGATCTCCAA TTTCTCTTCT
CCTTCATCCG GCCACTGGTA CCTCACCCTC AAAGACAGCC ATTCGCAGCT GCGCTGTGCC
ATGTTCAAGG GGCGTAACAC CACAGTGGCA TTCAAGCCCA TCAACGGCCA GCAGGTGTTG
GTGCGTGGCA GTATCAGCGT GTATGAACCC AGAGGCGACT ATCAGCTGCT GATTGAAGCC
ATGTTCCCCG CTGGGGATGG CTTGCTGGCG GCCCAGTTTG AAGCCCTGAA GATGAAACTT
GCCGCCGAAG GTTTGTTTGC CCAGGACACC AAGCGGCCGC TGCCCGAGTC AATTCAGCGC
ATTGGGGTTA TCACCTCCCC AACAGGCGCG GCCATCCGCG ATGTGCTCCA TGTGCTGAAA
AGACGTGACC CAAGCGTGGA GGTAGTAATT TACCCCACGG CAGTTCAGGG CACCGGCGCC
GACAAAGACA TCATTCGTGC CATCGAGCTT GCCAACCAGA GGCTTGAAGT GGATGTGCTC
CTGCTCACCC GGGGAGGCGG GAGCCTCGAA GACCTCTGGT GCTTCAACAG CGAAGCCCTT
GCTCACGCCA TCTACAACAG CACCCTGACC ATAGTGAGCG CGGTGGGCCA TGAGGTAGAT
ACCAGCATTG CCGACTTTGT CGCCGATGTC AGAGCACCGA CGCCTTCTGC GGGCGCCGAG
CTGCTGTCGG GAGACCAAAG CCACAAGCAG CAAAAACTCG CCGGTGCCCT TGCCAGACTG
ACCCAGGGCT GGCGCCATTA CGCCCTTAAA CGTCATTCCG GTCTGATTTC ACTGCAATCC
CGGCTCGACC GGCAAGATCC TAAACGCCAG TTACAGCAGC AGTCCCAGCG CCTCGATGAG
TTGGAACTGC GGCTGACATC CAGTATTCAG AGACGCCTAT CGTCCCACAC GCTTACCACA
GAGCGGTTAA AGGCAAGGCT CGAACGCCAC TCACCGGCCC AGCGCTTGAT GATGGAACAG
CAGCGGCTCA CTTACCTCGA TGAAAGACTC AAGGGCGCCA TGGAAGACAG GCTGGAAGAT
GCGCAAACAC ACCTTGGGGG GCTCAGCCAC TCACTCGCCA GCGTGTCTCC ACTGGCGACC
TTAAGCCGCG GCTACTCCAT CACCCGAGAC GCTGGTGGCA GGGTACTGAC TCAGGCGAGC
AGCATGAAAA CCGGCGATAC CATAGAGACT CAACTGGAAC AGGGTTCACT TTTGGCCCGC
GTCATTGAGA TCAAGCCGGA GTAA
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| Protein sequence | MQVPKNDVYT VSRLNGEVRQ LLEGQLGRIW LTGEISNFSS PSSGHWYLTL KDSHSQLRCA
MFKGRNTTVA FKPINGQQVL VRGSISVYEP RGDYQLLIEA MFPAGDGLLA AQFEALKMKL
AAEGLFAQDT KRPLPESIQR IGVITSPTGA AIRDVLHVLK RRDPSVEVVI YPTAVQGTGA
DKDIIRAIEL ANQRLEVDVL LLTRGGGSLE DLWCFNSEAL AHAIYNSTLT IVSAVGHEVD
TSIADFVADV RAPTPSAGAE LLSGDQSHKQ QKLAGALARL TQGWRHYALK RHSGLISLQS
RLDRQDPKRQ LQQQSQRLDE LELRLTSSIQ RRLSSHTLTT ERLKARLERH SPAQRLMMEQ
QRLTYLDERL KGAMEDRLED AQTHLGGLSH SLASVSPLAT LSRGYSITRD AGGRVLTQAS
SMKTGDTIET QLEQGSLLAR VIEIKPE
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