| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2354 |
|---|
| Symbol | |
|---|
| ID | 4604604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2827640 |
|---|
| End bp | 2828020 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639781752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928229 |
|---|
| Protein GI | 119775489 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.373187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATTG ACCACATCAC CCTTTTGGTG TCATCGCTGG AAATAAGCAT GCCTTACTAC
GAGCAATTAC TGCCCTTGCT CGGTTTTTCA AAAAAGAAAA ACCACATCTG GACGGATGGT
GAGGGCTTTT TCTTTCAATT CCTGCAGGCA AAAACGGGTA CCTCAGCCTA TGAGCGTTAC
GGCGCCGGCA TGAATCACCT GGGCTTTGGC GCCTCATTGC CTGAGCAGGT TTATGGGGTG
CGCGCCGCCA TGGCGGAGGC GGGGTTTGAG GTGCCTGAGG TGCAAAATCT CGGTGGTGCC
GTCGCCCTGT TTATGAAAGA CCCTGACGGG GTGCGCTTCG AAGTCACCTA TTACCCACCG
GGGATGGCTG TGGTTGATTA A
|
|---|
| Protein sequence | MKIDHITLLV SSLEISMPYY EQLLPLLGFS KKKNHIWTDG EGFFFQFLQA KTGTSAYERY
GAGMNHLGFG ASLPEQVYGV RAAMAEAGFE VPEVQNLGGA VALFMKDPDG VRFEVTYYPP
GMAVVD
|
|---|
| |