| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2348 |
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| Symbol | |
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| ID | 4604598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2816153 |
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| End bp | 2817292 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781746 |
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| Product | cytochrome bd-I oxidase subunit II |
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| Protein accession | YP_928223 |
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| Protein GI | 119775483 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.245309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.859563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATT ACGAAGTATT GCGTTTTATC TGGTGGGCCC TGGTCGGCGT GCTCTTTATC
GGCTTCGCTG TCACCGACGG TTTCGACATG GGTGTGGGTG CCTTGCTGCC AGTTATCGGC
AAGGATGACA CCGACAGAAG AGTCATGATC AACACCGTTG CCCCCCACTG GGACGGTAAC
CAGGTATGGC TTATCACCGC CGGTGGCGCG CTCTTTGCCG CCTGGCCCAT GGTCTATGCC
GTGTCTTTCT CGGGCTTCTA TGTGGCCATG GTGATTGTGC TGCTGGCGCT GTTTTTGCGT
CCGGTGGGCT TTGACTATCG CTCCAAGATT GAAGCACCAA AATGGCGTAA GTCCTGGGAC
TGGGCGCTGT TTGTGGGCTC CTTCGTGCCG CCGCTGATTA TCGGTGTTGC CTTTGGTAAC
CTGCTGCAGG GCGTACCCTT CAATTTTGAT GAGTTCCTGC GTGCCAAATA CCACGGTGGC
CTGTTTGGTC TGCTTAACCC CTTCGGTCTG TTGGCCGGCT TGGTTAGCGT GAGCATGTTT
ATGATGCAGG GCGCAACCTG GCTGCAGATG AAGACTGAAG GCGAGCTGCG GGTGCGTGCC
ACCAATGCCG CTCAGCTGCT GGCACTTCTG CTGGTCGTAC TGTTTGCCGC GGCTGGTTTC
TGGGTCGCCA ATGGCATCGA TGGTTATGTG ATTACCTCGG CTATCGACAC CCACGCTGCC
TCTAATCCAG TGGGTAAAAC CGTTGAGTTG GTAAGTGGTG CCTGGATGGC GAACTATCAG
ACGTACCCCA TCACCATGGC TTTCCCTGTA CTGGGTCTGG CGATGCCGGT GCTGGTGATT
CTTGCAAGCC GTTTTAACCG CAGTGGTTTT GCCTTCCTGT TCAGCTCGCT GGCGGTTGCC
GGTGTGATCC TGACCTGCGG CGCGGCCATG TTCCCGTTCG TGATGCCATC TTCACTGGAG
CCGGGCGTGA GCCTGACCAT GTGGGATGCC ACCGCCAGTG AAATGACCCT GACCGTGATG
ACCTGGGCTG CCATTATCTT TGTTCCGATT GTGCTCTCGT ACACCATCTG GACTTACTAC
AAGATGTATG GTCGTCTGAG CCGTCAGTTC ATCGACAACA ACAAGCATTC ACTGTACTGA
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| Protein sequence | MFDYEVLRFI WWALVGVLFI GFAVTDGFDM GVGALLPVIG KDDTDRRVMI NTVAPHWDGN
QVWLITAGGA LFAAWPMVYA VSFSGFYVAM VIVLLALFLR PVGFDYRSKI EAPKWRKSWD
WALFVGSFVP PLIIGVAFGN LLQGVPFNFD EFLRAKYHGG LFGLLNPFGL LAGLVSVSMF
MMQGATWLQM KTEGELRVRA TNAAQLLALL LVVLFAAAGF WVANGIDGYV ITSAIDTHAA
SNPVGKTVEL VSGAWMANYQ TYPITMAFPV LGLAMPVLVI LASRFNRSGF AFLFSSLAVA
GVILTCGAAM FPFVMPSSLE PGVSLTMWDA TASEMTLTVM TWAAIIFVPI VLSYTIWTYY
KMYGRLSRQF IDNNKHSLY
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