Gene Sama_2347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2347 
Symbol 
ID4604597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2816027 
End bp2816140 
Gene Length114 bp 
Protein Length37 aa 
Translation table11 
GC content48% 
IMG OID639781745 
ProductCyd operon protein YbgT 
Protein accessionYP_928222 
Protein GI119775482 
COG category[S] Function unknown 
COG ID[COG4890] Predicted outer membrane lipoprotein 
TIGRFAM ID[TIGR02106] cyd operon protein YbgT 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.042231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.761879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTATT TCACCTGGAT TCTGGGCGTA CTCTTGGCCT GTTCCTTCGG GATTATCAAC 
GCCCTGTGGC TTGAAAACAC CGAAAACATG GATCGCAAGT CAGACGACGA ATAA
 
Protein sequence
MWYFTWILGV LLACSFGIIN ALWLENTENM DRKSDDE