| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2337 |
|---|
| Symbol | |
|---|
| ID | 4604587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2802822 |
|---|
| End bp | 2805302 |
|---|
| Gene Length | 2481 bp |
|---|
| Protein Length | 826 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639781735 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928212 |
|---|
| Protein GI | 119775472 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.239446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.451295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATCG AAAGTTCCGT AACCCCCATA TTTTCGGTAA CTCAGTTTGG TGAGACCTAC
CTTCCCAGCG TCAATCGTAC CTTGTTCGAA AATCAACCTT CAGAAAAGTT ATTCGAACGA
GAATATCCAA ACCTTTTCAC AAAAGAAAAT CACCTCTATG TGATAGTAGG GACAGATTCC
GGTTTATTGG CAAACTACGT ACTTGAACAC AAGCTTCCAA AGGGCAGTCG CTACCTGTTT
GTCGAACTGG AATCAGTGAT GGCTTTAATG AATATAGAAA TACCTGAAAA CGTGAAGGAC
AGAGTAAAGG TACACTCTCT CGCCACGTTT GCTGAGGCCA TAGAACAAGA CCCTATACCG
GTGTACTTTA TAAAAAAAGC GACCAGAACC TATAAATCCC AAGCCGCAAA ATATGCCTAT
ATCACTGAAT ATGTGTCCCT GCTAAGTAAC GTTGAAAAGA TAATGGAGCA GCAGACCTTT
GTTCATTCAG AAACGCTGAA CCAAAAACTG TTTGTAAAAC GTCAGCTGGA AAATGTGGCA
GACAATCTTG TACCGGCCAA AGTACTTTCC GAAAGTTTTT CAGGCAAGAG CTGTATCATC
CTCGCCGGCG GCCCCTCCCT TGATGAAAGC TTACCCTGGG TAATAAATCA TCAAGAAGAG
CTTGTCATTT TTGCAGTTTC AAGAATTTGC CGCCAGTTAT GCTCAATTGG CTTAATCCCG
GATATTGTCG TATCGGTTGA CCCCTACGAA GCAAGCTTTG ATGTCAGTAA AGAAATGCTA
ACGCTTCCTG AATCGGTATT GTTTATCAAC AGTAATCATA TCGAACCCCG ATTACTGGCT
AATTGGAGAG GTCCCTCTGT TTACACAGGT AGCTATCTTC CATGGAACAG TGAGGAAACT
GACGCCAATA TCTCAACGGT TGGCCCCACT GTTACGAATG CAGCAGTCAA AGTTGCAGCC
AGTATGGGAT TCGAGCAGAT CTTATTGGCT GGTACCGATC TTTGTTTTTC CAGCTCTGGA
GATACCCACG CTAAAGGCAG TTTGGAAGCC GCCGCTGGCG CCAATATGAG CATCATTGGC
GATTGGGTCG ACACGTATAA CGGTTCCAAG GCTGAAACGT CTATCCAAAT GGTACATGCA
CGGGAAGCGC TTGAATATGA AGTAACCCAA CTCCAAGCGG GTCAAAAAAT ATTCAACTTA
TCTGCCCAAG CCGCCATGGT TAAAGGAATT GAACATAGGC CCACATCCAA TATCCAACTA
TCCGGTCCCT TGGAGAAAAG CACAGTTATC ACCAAACTGA CTCAACCACC GCCAAGGAAA
GAGCGTATCC AAAAAATTTC GGATGCCAAA ATTCAACTGA ACAAAGCATA CGAGTCGCTT
AAGTCAATAC ATGATGCCAG TGTCGAAGCG CTTAAAATCA ACACTGTCCT CAAAACAACA
AAATCAAGCC ACAGTGATGC TTACTATCGT TCGTTATTAG GACGGATAGA CAAAATTGAA
CAGCAGCTGT CTGAGCGTTA TTCATCAATG TATCAATTTA TTAAGTTTTT CGGCTATGCC
GAATTTACTC AGTTCCTTAC GCCGACTGAC AGTAGCGAGT GGCAGCGAAA GGACCTCTTT
TTTATGTCGG ACGCATACTA CAGAGCTGTA CGTTCCAGCG CTGAACAGTT GATACAACTC
ATTTCCCAGG CTCAGGAAAA AGTCAGCTTA CGCTTGGAGG AATTATCCCC TAACGCAAAC
TCTGGTGTGT TGTTCAGAAA ATGGGCTGAG TATCAGGAAT TTGGTCGTGC CATGATATGG
CAAAAAGCCA ATATGGGCAT ACTCTCCGGG CTGCAGCTAG GGCAAATTCA AGCATTGAAT
GAAAAGTTTA ATGAACTGAT TCATCAAAAA TCGAATTACT CAAAGCGAAT TGAAAAAAGC
CATTCGAAGC TGGACCAAGT AGAAAGAAAG CTTCTGCTGC TGCAAAGCAC ACACAATGGC
TTTGGCCTGT CGCAACTGGC GGCAATTCTG AAAAGTAGAG CCGCGACAGA TAAAGAAGCG
GGAAGATTAT ACAGGCTGGC AGACTGTTTT TATCATCAGT TGAAGGGAGA GCATTCACTC
GCGCTGGGCA CGCTCCTCAA GTTAGATGAG TCACAGCTCA CAGAGCGGGA ATTCAAGGAA
ATGGCCTCCC TTGGCCTCAA GGTGCAAAAA CCTGAAATCT CCTTGCTGGC GCTGGACAAA
TTGATTGAAT ACAGCGACGA GTATTATCCC CTCTACGCCA GTGTGCTTAA ATTGACTGGT
CAGTATCAAC ACGCCGCCGA AACCTATCTT GAGTACCTGA ATAAGTACCC GGGTGATGTG
GTGACCTGGA TTAAGTTTGG CCAGTTTATG GTGGAAGCGG GTGAGCGGGA CATGGCTATC
AGCGCCTTCC ATCAGGCAGA ACAGGCGGAT CCCGGTAATG CCGTTGCCAA GCAATATTTA
AGCGAACTCT ATCACCAATA A
|
|---|
| Protein sequence | MSIESSVTPI FSVTQFGETY LPSVNRTLFE NQPSEKLFER EYPNLFTKEN HLYVIVGTDS
GLLANYVLEH KLPKGSRYLF VELESVMALM NIEIPENVKD RVKVHSLATF AEAIEQDPIP
VYFIKKATRT YKSQAAKYAY ITEYVSLLSN VEKIMEQQTF VHSETLNQKL FVKRQLENVA
DNLVPAKVLS ESFSGKSCII LAGGPSLDES LPWVINHQEE LVIFAVSRIC RQLCSIGLIP
DIVVSVDPYE ASFDVSKEML TLPESVLFIN SNHIEPRLLA NWRGPSVYTG SYLPWNSEET
DANISTVGPT VTNAAVKVAA SMGFEQILLA GTDLCFSSSG DTHAKGSLEA AAGANMSIIG
DWVDTYNGSK AETSIQMVHA REALEYEVTQ LQAGQKIFNL SAQAAMVKGI EHRPTSNIQL
SGPLEKSTVI TKLTQPPPRK ERIQKISDAK IQLNKAYESL KSIHDASVEA LKINTVLKTT
KSSHSDAYYR SLLGRIDKIE QQLSERYSSM YQFIKFFGYA EFTQFLTPTD SSEWQRKDLF
FMSDAYYRAV RSSAEQLIQL ISQAQEKVSL RLEELSPNAN SGVLFRKWAE YQEFGRAMIW
QKANMGILSG LQLGQIQALN EKFNELIHQK SNYSKRIEKS HSKLDQVERK LLLLQSTHNG
FGLSQLAAIL KSRAATDKEA GRLYRLADCF YHQLKGEHSL ALGTLLKLDE SQLTEREFKE
MASLGLKVQK PEISLLALDK LIEYSDEYYP LYASVLKLTG QYQHAAETYL EYLNKYPGDV
VTWIKFGQFM VEAGERDMAI SAFHQAEQAD PGNAVAKQYL SELYHQ
|
|---|
| |