| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2329 |
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| Symbol | |
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| ID | 4604579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2794887 |
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| End bp | 2796044 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639781727 |
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| Product | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| Protein accession | YP_928204 |
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| Protein GI | 119775464 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.221621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTG AAACGCTCGT TGAGTTTGTA CGAGACATAT ACCAAAGCAA TGAGCAAATC
CCTTTGCATG TGCCGAGCTT CGACGGCAAT GAAAAGTCGT ATGTACTCAA CTGCATAGAC
AGCACTTTTG TGTCGAGTGT CGGCCAATAT GTCAACAGGT TTGAACGCCA GATAGCGGAC
TTTACCGGTT GTGCCGGCGC CGTCGCAACC GTCAATGGTA CTGCTGCTCT GCATACAGCT
CTTCACCTCG CAGGGGTTGA GCGTAACGAC TTGGTGATCA CTCAGGCCCT GACATTTGTC
GCAACGGCAA ATGCGTTGTT TCATATGGGC GCGCAGCCGA TATTTGTCGA TATCTCACCA
CTGAGCTTGG GGCTGTGCCC AAAAGCGGTA GCGTGTTATC TGCAGGAAAA CGCGAAACTG
ACAGAGTTTG GCCCCGTTCA TAAGCAAACT GGGCAAAGAA TTAAGGCTGT GGTGCCAATG
CACACATTTG GGCATCCGGT GGAACTTGAC GAACTGGTCA GTGTTTGCGC CAAATGGCAA
CTCACCCTGG TCGAGGATGC AGCAGAAAGT CTTGGATCCT ATTACAAGGG GCACCATACC
GGAACCGTAG GAAAATTCGG TGCCATCAGC TTTAACGGTA ATAAAATCAT CACCACAGGA
GGCGGCGGTA TGCTGCTTTG CAGCGATGAG CAAAGCGCAT TGCATGCAAA ACATGTGACC
ACCACAGCCA AAGTACCCCA CCCCTATGAG TTTTATCATG ATGAGCCGGG ATTTAATTAC
CGAATGCCTA ATATCAATGC TGCATTGGGT TGTGCTCAGA TGGAATGTTT ACCGCAATAT
CTCGCTCAAA AACGGCAGCT TGCCCATCAG TACGAAGCAT TATTTGCGTC GAGTGACCTT
AAATTCGTCA CAGAGCCGGC ATATGCCCAA TCTAACTACT GGCTCAATGC CATCGTTTGT
GCTGATCGTC AACAGCGTGA CCAGTTACTG CAATTTACCA ATGTTGCAGG TGTTATGACC
CGGCCTGTTT GGCAGCTGAT GCACCGTTTG CCCATGTATC AATACAGTCT TCGGGGTGAA
TTGACCAACG CCGAGTTCTT TGAAGCCCGC TTGATTAACC TGCCCAGCAC GCCGGTAGCC
GAGGTGGTCA ATGATTGA
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| Protein sequence | MKPETLVEFV RDIYQSNEQI PLHVPSFDGN EKSYVLNCID STFVSSVGQY VNRFERQIAD
FTGCAGAVAT VNGTAALHTA LHLAGVERND LVITQALTFV ATANALFHMG AQPIFVDISP
LSLGLCPKAV ACYLQENAKL TEFGPVHKQT GQRIKAVVPM HTFGHPVELD ELVSVCAKWQ
LTLVEDAAES LGSYYKGHHT GTVGKFGAIS FNGNKIITTG GGGMLLCSDE QSALHAKHVT
TTAKVPHPYE FYHDEPGFNY RMPNINAALG CAQMECLPQY LAQKRQLAHQ YEALFASSDL
KFVTEPAYAQ SNYWLNAIVC ADRQQRDQLL QFTNVAGVMT RPVWQLMHRL PMYQYSLRGE
LTNAEFFEAR LINLPSTPVA EVVND
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