Gene Sama_2321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2321 
SymbolflgA 
ID4604571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2786118 
End bp2786825 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content50% 
IMG OID639781718 
Productflagellar basal body P-ring biosynthesis protein FlgA 
Protein accessionYP_928196 
Protein GI119775456 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.460047 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.22493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA AGTTAGCACA AGTTTTGGTG ATTCTGACGT TGTTACCCAG GGTATCAATC 
GCAGAAGAAC CTCATACCCC GAGTATATCG GCCATCGCAT CGGCGGCTGA AGCCGTGGTT
ATTGAAAAAA TTGATGCACC GGCCAATGCC AAAATCAGCG TACAAGCCCA AAGCCTGGAA
AGCCGAGGTA ATCTGCCTCG ATGTGAAGGA CCTGTATCAG CAAGACTTGC CACCGACAGA
CCTATTTCCC GAAACAATAC GGTGCGCATC AGCTGTGTTA GCCCGGATCT GGACTATCCT
TGGCAGATGT ACCTTTCAGT ACGCGCAGAA GTGCTTTTCC CTGTGGTGGT GGCTAAACGC
CCGCTCGGTA ATGGTGATTT ACTGGACGCA GAGAGCATAG AAGTCAGATA TGTCGACAAA
ACACTGCTGC GTGGCCAACA GTTTTCGCAC TTACAGCCCC TCTATGGGTC TCGGGTGAAG
CGCCGGATCC CTCAGGACGC CCCCATTTTT GCCGACAACC TGTGTTTTGT GTGCAAGGGA
GATGCAGTAA CCATATACGC AAAATCGGCC AGCTTTGAGA TAAAAACCCA GGGAGAGGCC
TTGGCCGATG GAAACGAAGG CGATAGGATT AGGATTAAAA ATATCAATTC AGACAGGGTA
TTAGAGGCTA CTGTCATTGG CGTTGGCGAA GTGGAAGTCA AAATGTAA
 
Protein sequence
MKVKLAQVLV ILTLLPRVSI AEEPHTPSIS AIASAAEAVV IEKIDAPANA KISVQAQSLE 
SRGNLPRCEG PVSARLATDR PISRNNTVRI SCVSPDLDYP WQMYLSVRAE VLFPVVVAKR
PLGNGDLLDA ESIEVRYVDK TLLRGQQFSH LQPLYGSRVK RRIPQDAPIF ADNLCFVCKG
DAVTIYAKSA SFEIKTQGEA LADGNEGDRI RIKNINSDRV LEATVIGVGE VEVKM