Gene Sama_2318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2318 
SymbolflgB 
ID4604568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2783460 
End bp2783858 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content53% 
IMG OID639781715 
Productflagellar basal body rod protein FlgB 
Protein accessionYP_928193 
Protein GI119775453 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.361668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCA GTTTCGATAA GGCGCTCGGG GTGCATCAAT TTACCCTTGG CATCAGAGCA 
GAGCGGGCAG AAGTCCTCTC AAGCAATATC GCCAACGCCG ATACCCCCCA TTATAAAGCA
CGGGATGTGA ACTTTGCCGA TGCGCTGCAA GCGGCACGCA GCCAGCAGCG TGGCATGCAA
ATGGCCCAAA CCAGTGAAGG GCATTTTGAC TTGCAAGCAT TGAGCCGGCA GCACGTGCAG
TTTCGTGTTC CCAATCAGCC CGACACCGGT GATGGTAACA CGGTGGATAT TCAGCAGGAA
CAGTCTGCCT TTATGCAGAA TGCGCTCGAA TATCAGATGT CGCTGGGCTT TCTGGAAGGC
AAGTTCAACG GTATGAAAAA GGCTATTAAA GGAGACTGA
 
Protein sequence
MAISFDKALG VHQFTLGIRA ERAEVLSSNI ANADTPHYKA RDVNFADALQ AARSQQRGMQ 
MAQTSEGHFD LQALSRQHVQ FRVPNQPDTG DGNTVDIQQE QSAFMQNALE YQMSLGFLEG
KFNGMKKAIK GD