| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2315 |
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| Symbol | flgE |
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| ID | 4604565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2780894 |
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| End bp | 2782255 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781712 |
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| Product | flagellar hook protein FlgE |
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| Protein accession | YP_928190 |
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| Protein GI | 119775450 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.260211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTCA ATATCGCACT CAGTGGCATT GCTGCCGCCC AGAAAGATTT GAACACCACA
GCCAACAACA TCGCCAACGT CAACACCACG GGCTTTAAAG AGTCACGTGC TGAGTTTGCC
GATGTGTATG CTGCGTCGAT ATTTTCCAAC AGCAAAACCC AGGTGGGTGG CGGTGTAACC
ACTACCCAGG TGGCACAGCA GTTCCATCAG GGCAGTTTGC AATTCACCAG CAACGCGCTG
GATTTGGCCA TTAGCGGCGG CGGTTTCTTT GTGACCTCCG CCGACCCTTC GGCCCGTGAT
TACAGCTTTA CCCGTGCCGG CGCTTTTAAG GTAGACAGTA ACAACTACTT GGTGGATTCC
GCAGGCAACT TCCTGCAAAC CTTCCCGGTG GACAAATTCG GGAACTCTAC CTCAGTGAGT
TTGACCACCA CTCGTCCGGT TCAAATTCCT GACACTGCCG GTAGCCCAGT GATGACTGAG
AATGTGGGGG TTCAGATGAA CCTGAACGCC GGTGAAAAGA CCAAAGACCC TGCGGCTTTT
GATCCGGATG ATCCAACCAC CTTCAACAAC TCTACCTCGT CGACCATTTA TGACTCCCTG
GGTGAGCCAC ACATTTTGAC CACCTACTTT GTACGGCCAA ACGATGGTGC CTACACAGGG
GAAAACAACT GGGTGGCTTA CTATGCACTC GATGGTCAGC CTGTGAATCT GGGTGGTGGC
GCAGGTACTT ACCAGACGGA TACTGACGGT GATGGCGTCC CAGACACACC TGCAACCGCG
CAAACTACCG GTGGCTGGAC TGGTTCTGTG CTGACCTTTA ACAGCACAGG TACTTATACA
GGCACCAACC CAGCCATAAT CACCACAGAA CCTCTGGGGA TTGGTGGTGC CGGTATTCTT
GGACCCGGCG CCGATGGTAG CCAAACATTG ACCATCAACT TTGCCAACCC GACTCAGTAC
GCTTCTGCTT TTGAAGTAAC CGAGCTGACT CAGGATGGTA CCACTGTGGG CCGCCTGACC
AACGTGGAAG TAGGTGAAGA TGGCCTGATT AAAGCCGCCT ACAGCAATGG CAGTACAGTG
CCCCTTGGCC GCGTTGCTTT GGTGCGTTTC GCCAACGAGC AGGGATTGAC CCAGGTGGGT
AACACTTCCT GGAAAGAAAG CCTGGCCTCG GGTACGGCCC TTGCCGGTGA AGCCAACAGT
GGTACTTTTG GCGCTATTCG TTCGGCGGCG CTGGAACAAT CTAACGTGGA TTTGACCACA
GAGCTGGTGG ACCTGATTTC AGCGCAGCGT AACTTCCAGG CCAACAGCCG TACATTGGAA
GTGAATAACA CGCTGCAGCA GACCATTCTG CAGATCCGTT AA
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| Protein sequence | MSFNIALSGI AAAQKDLNTT ANNIANVNTT GFKESRAEFA DVYAASIFSN SKTQVGGGVT
TTQVAQQFHQ GSLQFTSNAL DLAISGGGFF VTSADPSARD YSFTRAGAFK VDSNNYLVDS
AGNFLQTFPV DKFGNSTSVS LTTTRPVQIP DTAGSPVMTE NVGVQMNLNA GEKTKDPAAF
DPDDPTTFNN STSSTIYDSL GEPHILTTYF VRPNDGAYTG ENNWVAYYAL DGQPVNLGGG
AGTYQTDTDG DGVPDTPATA QTTGGWTGSV LTFNSTGTYT GTNPAIITTE PLGIGGAGIL
GPGADGSQTL TINFANPTQY ASAFEVTELT QDGTTVGRLT NVEVGEDGLI KAAYSNGSTV
PLGRVALVRF ANEQGLTQVG NTSWKESLAS GTALAGEANS GTFGAIRSAA LEQSNVDLTT
ELVDLISAQR NFQANSRTLE VNNTLQQTIL QIR
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