Gene Sama_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2313 
SymbolflgG 
ID4604563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2779183 
End bp2779971 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content53% 
IMG OID639781710 
Productflagellar basal body rod protein FlgG 
Protein accessionYP_928188 
Protein GI119775448 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.977542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.355745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCG CATTATGGAT AAGTAAAACT GGCTTAGATG CTCAGCAAAC GGATATCGCC 
GTGATATCCA ACAACGTCGC CAACGCCAGT ACCGTCGGCT ACAAAAAAAG CCGCGCCGTG
TTTGAAGATT TACTCTATCA AACTGTGAAT CAGGCAGGCG GTATCAGCGC GTCCAACACC
AAGTTACCCA ATGGCCTGAA TATAGGCGCC GGCACCAAGG TGGTGGCAAC TCAAAAGATG
TTTACCCAGG GCAACATGCT GACCACGGAT AATGCGCTGG ACATGATGAT TGAAGGCCCG
GGCTTTTTTG AAATCCAGTT ACCCGATGGC ACCACAGCTT ATACCCGTAA CGGTCAGTTC
TCGCTGGACG ATACCGGTCA GATAGTGACG CCTGGCTCTG GTTATGTGCT TCAGCCAGCC
ATCACCATTC CCGATAACGC CACCAGTATC ACTGTGTCTG CCGAAGGCGA AGTGTCTGTA
AAAACCCCGG GTGCCGCAGA AAGCCAGATC GTGGGGCAGC TGACCCTGTC TGACTTTATC
AATCCCTCCG GCCTCGACCC TATAGGTCAG AACCTGTACC TGGAAACCGG TGCCAGCGGC
ACGCCCATTC AGGGCACAGC CTCACTGGAT GGTATGGGGG CGATTCGTCA GGGGGCACTT
GAAACCTCCA ACGTGAATGT GACCGAGGAG CTGGTCAATC TCATCGAAAG TCAGCGCATC
TATGAAATGA ACTCCAAGGT GATTTCAGCA GTGGATCAGA TGCTGGCCTA CGTTAACCAG
AATCTGTAA
 
Protein sequence
MHPALWISKT GLDAQQTDIA VISNNVANAS TVGYKKSRAV FEDLLYQTVN QAGGISASNT 
KLPNGLNIGA GTKVVATQKM FTQGNMLTTD NALDMMIEGP GFFEIQLPDG TTAYTRNGQF
SLDDTGQIVT PGSGYVLQPA ITIPDNATSI TVSAEGEVSV KTPGAAESQI VGQLTLSDFI
NPSGLDPIGQ NLYLETGASG TPIQGTASLD GMGAIRQGAL ETSNVNVTEE LVNLIESQRI
YEMNSKVISA VDQMLAYVNQ NL