| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2310 |
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| Symbol | flgJ |
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| ID | 4604560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2776246 |
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| End bp | 2777364 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781707 |
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| Product | flagellar rod assembly protein/muramidase FlgJ |
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| Protein accession | YP_928185 |
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| Protein GI | 119775445 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1705] Muramidase (flagellum-specific) |
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| TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.389731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAAGC TTTCAAACGC CTCACATTTC CTCGACATCG GTGGCCTGGA CAAATTAAGA
GCCCAGGCCA AGGCCGATAA CAAGGCAGCC CTGCGGGAAG TTGCCAAGCA ATTCGAGGGG
ATTTTTGTGC AGATGCTGAT GAAAAGCATG CGTGATGCCA ATGCCGTATT TGAATCCGAT
AGTCCCTTCA ACAGCCAGTA CACCAAGTTT TATGAAGAAA TGCGCGATCA GCAAATGGCC
GTCGACATGT CCCAAAAAGG CATGCTGGGG CTGGTGGATT TGATGGTGCA ACAGCTGTCT
CCCAAGGACA GCCCGATAAC ACCGTCATCA GTACTGGGCG GCGATAAGCG CTTTGATCTG
GGGGAGGTCC CCATGATGCT GCGCCGTGGC AAGGACGCTG AGGCAAAGGC ATCACTCGAA
GGGATTGAAA CGCCTCAGAT GGCTGAACGT CAACCTGTCG AGCGGCACAG CGATATGTCC
CTAAACATGG GGTTCCATGA AGCCCCGGTT CTGGATGCAC CAACAGCCGC ATCGGCTCCT
GCTTCCAGCG CCGCAGCACC TATATTCGAC CAATTGCTCG CCGGGAAACA AACGCCCAGT
CAGCAGATTG AAAGTGAGCG GGACAATCCG AATTTTGAGA GCCGTCAGGA CTTTATTCGT
GCCCTGATGC CACTGGCGAG CGAAGCTGCC AAGCGTCTGG GTACCAAGCC CGAGGTGTTG
ATTGCCCAAT CGGCACTGGA AACCGGTTGG GGCCAGAAGC TGGTAAGACG GACGGATGGC
AGCATGAGCA ATAACCTGTT CAACATCAAA GCCGACAAGC GCTGGGAAGG GGAAAAAGCG
GCAGTCAATA CCCTGGAATT TGAGCAGGGC GTTGCGGTAC GGCAACGAGC TGACTTCCGG
GTTTACGACA CCCTGGAGCA GAGCTTCAAC GATTTTGTCG ATTTCCTGAA AAGCGGCGAG
CGCTACGGTG ATGCCCTGAA ACAAGCGGCG AGGCCTGCAT CCTTTGTGCA GGGGTTACAA
AATGCCGGGT ATGCCACAGA CCCTCAATAT GCCGACAAGG TGATGCGGGT AATGCAGGCG
GTAACGTCTG AAATCAAGGC CATGGCCCTT GGCAACTGA
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| Protein sequence | MEKLSNASHF LDIGGLDKLR AQAKADNKAA LREVAKQFEG IFVQMLMKSM RDANAVFESD
SPFNSQYTKF YEEMRDQQMA VDMSQKGMLG LVDLMVQQLS PKDSPITPSS VLGGDKRFDL
GEVPMMLRRG KDAEAKASLE GIETPQMAER QPVERHSDMS LNMGFHEAPV LDAPTAASAP
ASSAAAPIFD QLLAGKQTPS QQIESERDNP NFESRQDFIR ALMPLASEAA KRLGTKPEVL
IAQSALETGW GQKLVRRTDG SMSNNLFNIK ADKRWEGEKA AVNTLEFEQG VAVRQRADFR
VYDTLEQSFN DFVDFLKSGE RYGDALKQAA RPASFVQGLQ NAGYATDPQY ADKVMRVMQA
VTSEIKAMAL GN
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