Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2308 |
Symbol | flgL |
ID | 4604558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2773090 |
End bp | 2774295 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781705 |
Product | flagellar hook-associated protein FlgL |
Protein accession | YP_928183 |
Protein GI | 119775443 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.24261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTATTT CTACCTCGCA AATGTTTACC CAGAACACCA ATAACATACT GCAAAAGCAG ACAGAGACCG CGAAGCTGCT CGAACAGCTG TCCAGTGGCA AGAAGGTGAA TACCTCGGGT GACGACCCTG TGGCGGCCTT GGGTATCGAC AATCTCAACC AGCAGCAGGC GCTGGTGGAT CAATTTCTGA AGAACATCGA CTACGCCAAA AATCATTTAG GCATTGCCGA GAGTAAGCTT GGCAGCGCCG AGGAGTTGGT TACCGGTTTA CGAGAACAAA TTCTGCGCGG GGTAAATGGT GGCCTTTCGC CCTCCGAGCG GCAAATGATT GCCGATGAGA TGCGTGGCAG CCTGCAGGAA TTGCTGAATG TGGCAAACAC CCGGGATGAG TCCGGCAACT TTATGTTCTC CGGTTTTAAA ACAGACACAG AACCCTTTGC CTTCGACGGT GCCGGCAACA TGGTTTATAG CGGTGATGCC GGCGTGCGTG ACGCCATGAT TTCCCGTGGC ATCGCCATGG GCACCAATGT GCCCGGCGAT ATGGCGTTTA TGACGTCGCC CAACGCACTT GGCGATTATA CCGTCAATTA TTTGTCGAGC CAGGCAGGTG ATTTTAAGGT TCAAAGCGCT GCGATAACCA ACCCAGCAGC TCATGTGGAA GACACTTATA CCTTTAATTT TATTGATAAT GGTTCAGGCG GCGTAAACCT GGAAGTGCGT GACAGTGCCA ATGGGCTGGT CACCACAGTG AACAACTTTG ATGCCACCAA TCCTGTTAGT TTCAACGGAA TAGACGTCAA GCTGGAAGGC ACACCAGCCG CTGGCGACAG TATTTCCCTG GCTCCTCAGG CTGAAGTCAG CATTTTCGAC ACCATTAATA AGGCTATCGC CCTGATAGAA GACGATAGTC GCATGAATTC TCCCGCTGGT ATCGCAGAGT TGGCACAGCT CTTGAATGAC ACTGACAGCG GATTGAATCA GCTCAGCACC GCCAGAAGCG TGGCAGGTAA TAACCTCAAG AGTCTTGAGA GTTACGCCGG ACGACACGCA GAAGAGCAGG TCGTCAATAC CTCGGCGCTG TCATTGCTGG AAGATCTGGA TTACGCAACG GCGATTACGG AATTTGAAAA GCAGCAGCTT GCATTGAACG CAGTCTCCAA TGTGTTTAGC AGAGTTGGTT CTGTGTCTTT GTTCGACTAC TTGTAG
|
Protein sequence | MRISTSQMFT QNTNNILQKQ TETAKLLEQL SSGKKVNTSG DDPVAALGID NLNQQQALVD QFLKNIDYAK NHLGIAESKL GSAEELVTGL REQILRGVNG GLSPSERQMI ADEMRGSLQE LLNVANTRDE SGNFMFSGFK TDTEPFAFDG AGNMVYSGDA GVRDAMISRG IAMGTNVPGD MAFMTSPNAL GDYTVNYLSS QAGDFKVQSA AITNPAAHVE DTYTFNFIDN GSGGVNLEVR DSANGLVTTV NNFDATNPVS FNGIDVKLEG TPAAGDSISL APQAEVSIFD TINKAIALIE DDSRMNSPAG IAELAQLLND TDSGLNQLST ARSVAGNNLK SLESYAGRHA EEQVVNTSAL SLLEDLDYAT AITEFEKQQL ALNAVSNVFS RVGSVSLFDY L
|
| |