Gene Sama_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2294 
SymbolfliI 
ID4604544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2758777 
End bp2760117 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content59% 
IMG OID639781691 
Productflagellum-specific ATP synthase 
Protein accessionYP_928169 
Protein GI119775429 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATC GTCGCCACCA TCTACTGAAT AACCTGCGTC AGCTGCGGCA ATCCTTACCG 
GTCAATCGTC CGGTAGCCGA AGGTCAGCTC GTGCGCGTGG TGGGGCTGAC GCTGGAAGCC
AGTGGTTGCC GTGCCCCCGT CGGCAGTCTC TGTGCCATCG ACACCATGGG TGGAGAGCTT
ATTGCCGAAG TGGTCGGTTT TGATGAAGAC CTGCTGTATT TGATGCCCAT TGAAGAGTTA
AAGGGCGTGC TGCCCGGTGC CAGAGTCCGG CCATTGGGTG AGCAAACCGG TATCCACGTG
GGCATGTCGC TGCTAGGCCG TGTGCTGGAT GGCGGTGGCG AGCCCCTCGA CGGTCTGGGT
CCTTTAGGCA CCACAGACAT TGCCCCCCGT CATGGCCCTG CCATTAATCC ACTTGCACGC
AGACCCATTC ATGAGCCGCT TGATGTGGGC ATTCGTGCCA TCAATGCCAT GTTGACTGTC
GGTAAGGGGC AGCGCATGGG GCTGTTTGCC GGTTCGGGCG TGGGTAAGTC GGTGCTCCTT
GGCATGATGA CCCGCGGCAC CACGGCCGAT GTGATTGTGG TCGGGCTGGT CGGCGAACGT
GGCCGCGAAG TGAAAGAGTT TATTGAGGAG ATTTTGGGGC CCGAAGGGCG TGCGCGTTCT
GTGGTGGTGG CGGCGCCCGC CGATACCTCG CCTTTGATGC GCCTTCGTGC CTGTGAAACC
TCTACCCGCA TCGCCGAATA CTTCCGCGAT TTGGGATTTA ATGTGCTGCT GCTTATGGAT
AGTCTGACCC GTTACGCTCA GGCGCAGCGT GAGATTGCCC TGGCAGTGGG AGAGCCTCCT
GCAACCAAGG GGTATCCACC TTCTGTGTTC GCCAAACTGC CAAGGCTCGT CGAGCGGGCC
GGAAACGGTG GGCCTGGGCA GGGTTCCATA ACCGCGTTTT ACACAGTATT GACCGAAGGG
GACGATTTGC AGGACCCCAT TGCCGATGCG GCCCGCGCCA TCCTGGATGG TCACATAGTG
CTCTCACGCA CCTTGGCTGA CTCAGGTCAC TATCCCGCCA TCGATATTGA AGCCTCCATC
AGCCGGGTCG CCCCCATGGT CATCAGCCCG GCGCACCTGG AGGCAATGCG GCGGGTTAAA
CAAACGTATT CTCTCTATCA GCAAAATCGC GATCTGATCT CCATCGGCGC CTATGCCGCC
GGCAGTGACC CACGTATCGA CAATGCCATT CGCTTGCAGC CGGCCATGAA TGCTTTTCTG
CGTCAGGGGA TGCGTGATGC CATCAGTCTG TCCGACAGTG AAACCATGCT CGGCCAAATT
GCCGCTCAAT GTAAGGGCTA A
 
Protein sequence
MINRRHHLLN NLRQLRQSLP VNRPVAEGQL VRVVGLTLEA SGCRAPVGSL CAIDTMGGEL 
IAEVVGFDED LLYLMPIEEL KGVLPGARVR PLGEQTGIHV GMSLLGRVLD GGGEPLDGLG
PLGTTDIAPR HGPAINPLAR RPIHEPLDVG IRAINAMLTV GKGQRMGLFA GSGVGKSVLL
GMMTRGTTAD VIVVGLVGER GREVKEFIEE ILGPEGRARS VVVAAPADTS PLMRLRACET
STRIAEYFRD LGFNVLLLMD SLTRYAQAQR EIALAVGEPP ATKGYPPSVF AKLPRLVERA
GNGGPGQGSI TAFYTVLTEG DDLQDPIADA ARAILDGHIV LSRTLADSGH YPAIDIEASI
SRVAPMVISP AHLEAMRRVK QTYSLYQQNR DLISIGAYAA GSDPRIDNAI RLQPAMNAFL
RQGMRDAISL SDSETMLGQI AAQCKG