| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2293 |
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| Symbol | |
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| ID | 4604543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2758327 |
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| End bp | 2758773 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781690 |
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| Product | flagellar protein FliJ |
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| Protein accession | YP_928168 |
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| Protein GI | 119775428 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2882] Flagellar biosynthesis chaperone |
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| TIGRFAM ID | [TIGR02473] flagellar export protein FliJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.919883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGCC CCAATCCGCT GCTGACTGTT TTGAAACTGG CACAGGATGC CGAGGAGCAG
GCGGCGCTGC AACTTCGCAG TGCGCAGTTG GAACTCGGTC GCCTGAAGCA GCAACTGGAC
GCCCTCAATC AATACCGACT CGACTATATG CGTCAACTTT CCGGCCAGGA AGGAAAGAAC
ATCAGTGCCA GCTACTATCA GCAGTTTCAT CGGTTTATTA AGCAAATCGA CCAAGCGATA
GGCCAACAGG TGCAAAGTGT GACCGGCGCA GAAACCCAGT TGGAGCACAG GCGCCGCCAC
TGGCTGGAGA AGCAGCAAAA GCGTAAAGCG GTCGAGCTGC TGCTTAAACA CAAGGCTGAC
AAACGGGAAG CCAAAGAGGC GAGACTTGAG CAAAAATTGC TGGACGAGTT TGCCATGCAG
CAATTTATTC GCAAAGGCTC ACACTAG
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| Protein sequence | MARPNPLLTV LKLAQDAEEQ AALQLRSAQL ELGRLKQQLD ALNQYRLDYM RQLSGQEGKN
ISASYYQQFH RFIKQIDQAI GQQVQSVTGA ETQLEHRRRH WLEKQQKRKA VELLLKHKAD
KREAKEARLE QKLLDEFAMQ QFIRKGSH
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