| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2266 |
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| Symbol | |
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| ID | 4604516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2731622 |
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| End bp | 2733094 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781663 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_928141 |
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| Protein GI | 119775401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000291592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00874925 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA ATTCCCAGGG TACGATGCTC GGGCATCCAA AGGGGCTGTT TCTGCTGTTC
ACAACGGAAC TGTGGGAACG ATTCAGTTAT TACGCCATGC GTGCCATTTT GGTGCTGTAT
CTGGTTGACC GCGTACAAAG TGAGGGCGGT CATGGCTTAG GTTGGAGCCA AGCCGATGCA
ATTTCTCTGT ACGGTACTTT TACCGGCTTG GTGTACCTCA CCCCGCTGCT GGGTGGCTGG
TTAGCCGATA ATTTCCTTGG TCAACGTAAA GCCATCATGA TTGGCGGCAC CCTGATGGCT
GCCGGCCAAT TTATTCTGGG TACTCCACAC GCCTGGGTTC AAGGCATGGA GACCGAAGTA
TTCTACCTGG GTCTGGGTGT CCTTATCCTC GGTAACGGTC TGTTCAAGCC CAACATTTCT
ACCATGGTGG GTGATCTGTA TGCCGAAGGC GACCATCGCC GTGACGGCGC CTTTACCATC
TTCTACATGG GTATCAACGT AGGCGCCTTC CTGTCAGGTA TCATCGTTGG CTCTGTAGTG
AGCGCTTATG ATGGTAACTT CCAGGCTGGC TTTATCTGTG CCGGTATCGG AATGGTGCTT
TCACTCATTA TCCAATTCCT GTTTGCCCAA AAGTTGCTGG GCAATATCGG TACTGTGCCT
GCTGCCAAAC TTGAGAAGCA AAAAGACGAG GCCCGCGGTC AGGTGCGTAA AGAGCCGCTG
ACTAAAGTTG AGCGCGACCG TATCAAAGTG ATCATGGTGA TGGGTCTGTT CACCATCGTA
TTCTGGGCAG GTTTTGAACA GGCCGGCGGC CTGATGAACC TGTTTACCAA CGATTTTACC
GACCGCATGA TTGGCAGCTG GGAAGTACCC ACTACCTGGT TCCAATCTCT GAACGCCATG
TTCATCGTGA TTTTTGCCCC TGTGGTTGCT TCTATTTGGG TACGCCTGGG CGACCGTGAG
CCAAACTCAC CGGTTAAATT TGCGCTTGGC TTGGTTCTGC TGGCCATTGG CTTCCTGTTT
ATGATTGGTG CCGTGGTTGA GATGGGTGGT GACCCAACTG CCAAGTCCAG CATGTGGTGG
CTGGTTGGTG CCTACTTCTT CCACACCATG GGTGAACTGT GCTTGTCTCC AATCGGTCTG
TCTATGGTGA CCAAGCTCGC TCCCCTGCGC ATTGTATCGC TGATGATGGG GGCATGGTTC
CTGTTCATCG CCGCGGCCAA CAAGATTGGT GGTGTCGTTG GCTCCTTTAT CGGTCATGGT
GGTGAGAAAG AAGAGCAGCT GGCAAATGCC ATGTCTATCT TCGCCGGTAT CGCCATCACC
GCCGCTATTT CAGGTGTGAT CCTGTACTTC ATGGCTGACA AACTGGTTGA TTGGATGCAC
GGCGCCGAAA GCAAAGTGCA CCACACCGAA GAAGAAGCCC TTGAAGAGGA AATCGCCGTT
ACCGGCGAGC ATGAAGCGAT GAAGCGCAGC TGA
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| Protein sequence | MSENSQGTML GHPKGLFLLF TTELWERFSY YAMRAILVLY LVDRVQSEGG HGLGWSQADA
ISLYGTFTGL VYLTPLLGGW LADNFLGQRK AIMIGGTLMA AGQFILGTPH AWVQGMETEV
FYLGLGVLIL GNGLFKPNIS TMVGDLYAEG DHRRDGAFTI FYMGINVGAF LSGIIVGSVV
SAYDGNFQAG FICAGIGMVL SLIIQFLFAQ KLLGNIGTVP AAKLEKQKDE ARGQVRKEPL
TKVERDRIKV IMVMGLFTIV FWAGFEQAGG LMNLFTNDFT DRMIGSWEVP TTWFQSLNAM
FIVIFAPVVA SIWVRLGDRE PNSPVKFALG LVLLAIGFLF MIGAVVEMGG DPTAKSSMWW
LVGAYFFHTM GELCLSPIGL SMVTKLAPLR IVSLMMGAWF LFIAAANKIG GVVGSFIGHG
GEKEEQLANA MSIFAGIAIT AAISGVILYF MADKLVDWMH GAESKVHHTE EEALEEEIAV
TGEHEAMKRS
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