Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2261 |
Symbol | |
ID | 4604511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2724529 |
End bp | 2725650 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639781658 |
Product | UDP-N-acetylglucosamine 2-epimerase |
Protein accession | YP_928136 |
Protein GI | 119775396 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.133563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00246417 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAAA AGAAAGTGCT TACTGTTTTT GGTACACGTC CTGAAGCAAT TAAAATGGCC CCTCTGGTTA ATGCTTTAGC ATCCGATGAC CGTTTTGAAG CAAAGTGTTG CGTAACAGCT CAACACAGGG AAATGCTCGA TCAAGTACTA GAATTATTTG AAATAACACC AGATTATGAT CTTGATTTGA TGAAAGCAGG GCAGACACTT AATGAAGTCA CCGCCGGTAT TATTCAAAAA TTAAAACCAG TCCTTCAAGA ATTTAAGCCA GATGTCGTGC TTGTGCATGG TGATACAGCA ACGACTTTCG CTGCGAGCCT TGCTGCTTAC TATGAACAGA TTGCAGTAGG ACATGTAGAA GCAGGTCTGC GCACTGGCAA CATCTACTCG CCTTGGCCAG AAGAAGCAAA CCGTCGCTTA ACGGGAGTGC TGACTAAATA TCATTTTGCG CCAACAGAAA CATCGAAGCA GAATCTTCTA AAAGAAAACT TTGAACCAAG CAATATCATT GTCACAGGTA ATACTGTTAT CGATGCGTTA TTGATGGTGA AAGAAAAAAT TGACTCAGAC ACAGACCTTA ACCACACGAT AGCTGAACAG TTCCCTTTCA TAGATGAAAA CAAGAAGCTG ATCTTGGTTA CTGGTCATCG TAGGGAAAGT TTTGGTGGTG GATTTGAGCG TATTTGCGAA GCATTGGCAA CTGTCGCGAG AATGCATTCT GACGTACAAA TCCTATACCC AGTGCATTTG AACCCCAATG TAAGAGAACC AGTAAATCGT ATTTTGGGGG ATATAGATAA TATTTTTTTG ATCGAACCTC AACAATATCT TCCTTTCATT TACCTCATGG ACAAGGCGTA TATCATTCTT ACGGATTCTG GTGGAATACA GGAAGAAGCG CCATCTTTAG GTAAGCCTGT ATTAGTTATG AGAGATGCAA CTGAGCGTCC TGAAGCCGTA GAGGCTGGTA CAGTTAAGTT GGTTGGTACA GATGTCAAAC GAATAGTCTC AAGCTTGAAT GAATTATTGT GTGATGATTT AGCTTATCAA CATATGAGTG TTGCCCATAA CCCTTATGGA GATGGGAAAG CGTGTCACAG AATTCTTAAA GCATTAATTT AG
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Protein sequence | MAKKKVLTVF GTRPEAIKMA PLVNALASDD RFEAKCCVTA QHREMLDQVL ELFEITPDYD LDLMKAGQTL NEVTAGIIQK LKPVLQEFKP DVVLVHGDTA TTFAASLAAY YEQIAVGHVE AGLRTGNIYS PWPEEANRRL TGVLTKYHFA PTETSKQNLL KENFEPSNII VTGNTVIDAL LMVKEKIDSD TDLNHTIAEQ FPFIDENKKL ILVTGHRRES FGGGFERICE ALATVARMHS DVQILYPVHL NPNVREPVNR ILGDIDNIFL IEPQQYLPFI YLMDKAYIIL TDSGGIQEEA PSLGKPVLVM RDATERPEAV EAGTVKLVGT DVKRIVSSLN ELLCDDLAYQ HMSVAHNPYG DGKACHRILK ALI
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