Gene Sama_2261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2261 
Symbol 
ID4604511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2724529 
End bp2725650 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content41% 
IMG OID639781658 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_928136 
Protein GI119775396 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.133563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00246417 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAAAA AGAAAGTGCT TACTGTTTTT GGTACACGTC CTGAAGCAAT TAAAATGGCC 
CCTCTGGTTA ATGCTTTAGC ATCCGATGAC CGTTTTGAAG CAAAGTGTTG CGTAACAGCT
CAACACAGGG AAATGCTCGA TCAAGTACTA GAATTATTTG AAATAACACC AGATTATGAT
CTTGATTTGA TGAAAGCAGG GCAGACACTT AATGAAGTCA CCGCCGGTAT TATTCAAAAA
TTAAAACCAG TCCTTCAAGA ATTTAAGCCA GATGTCGTGC TTGTGCATGG TGATACAGCA
ACGACTTTCG CTGCGAGCCT TGCTGCTTAC TATGAACAGA TTGCAGTAGG ACATGTAGAA
GCAGGTCTGC GCACTGGCAA CATCTACTCG CCTTGGCCAG AAGAAGCAAA CCGTCGCTTA
ACGGGAGTGC TGACTAAATA TCATTTTGCG CCAACAGAAA CATCGAAGCA GAATCTTCTA
AAAGAAAACT TTGAACCAAG CAATATCATT GTCACAGGTA ATACTGTTAT CGATGCGTTA
TTGATGGTGA AAGAAAAAAT TGACTCAGAC ACAGACCTTA ACCACACGAT AGCTGAACAG
TTCCCTTTCA TAGATGAAAA CAAGAAGCTG ATCTTGGTTA CTGGTCATCG TAGGGAAAGT
TTTGGTGGTG GATTTGAGCG TATTTGCGAA GCATTGGCAA CTGTCGCGAG AATGCATTCT
GACGTACAAA TCCTATACCC AGTGCATTTG AACCCCAATG TAAGAGAACC AGTAAATCGT
ATTTTGGGGG ATATAGATAA TATTTTTTTG ATCGAACCTC AACAATATCT TCCTTTCATT
TACCTCATGG ACAAGGCGTA TATCATTCTT ACGGATTCTG GTGGAATACA GGAAGAAGCG
CCATCTTTAG GTAAGCCTGT ATTAGTTATG AGAGATGCAA CTGAGCGTCC TGAAGCCGTA
GAGGCTGGTA CAGTTAAGTT GGTTGGTACA GATGTCAAAC GAATAGTCTC AAGCTTGAAT
GAATTATTGT GTGATGATTT AGCTTATCAA CATATGAGTG TTGCCCATAA CCCTTATGGA
GATGGGAAAG CGTGTCACAG AATTCTTAAA GCATTAATTT AG
 
Protein sequence
MAKKKVLTVF GTRPEAIKMA PLVNALASDD RFEAKCCVTA QHREMLDQVL ELFEITPDYD 
LDLMKAGQTL NEVTAGIIQK LKPVLQEFKP DVVLVHGDTA TTFAASLAAY YEQIAVGHVE
AGLRTGNIYS PWPEEANRRL TGVLTKYHFA PTETSKQNLL KENFEPSNII VTGNTVIDAL
LMVKEKIDSD TDLNHTIAEQ FPFIDENKKL ILVTGHRRES FGGGFERICE ALATVARMHS
DVQILYPVHL NPNVREPVNR ILGDIDNIFL IEPQQYLPFI YLMDKAYIIL TDSGGIQEEA
PSLGKPVLVM RDATERPEAV EAGTVKLVGT DVKRIVSSLN ELLCDDLAYQ HMSVAHNPYG
DGKACHRILK ALI