| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2260 |
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| Symbol | |
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| ID | 4604510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2723235 |
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| End bp | 2724512 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639781657 |
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| Product | UDP-glucose/GDP-mannose dehydrogenase |
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| Protein accession | YP_928135 |
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| Protein GI | 119775395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0462804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00212267 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGTCGT TGAAAGAATT AAAAATAGGC GTTATTGGCT TAGGTTACGT TGGTCTCCCT
TTGGCCGTTG AGTTTGGCAA AAAATATCCA ACATTGGGAT TTGATATTAA TGAACTACGT
GTAAGAGAGT TAAGTCAGGG GAGAGATGCG ACACTTGAAT GTACTGCAGA AGAATTGTCA
GAAGCGAGTC TATTAAAGTA TACATCTACT TTGGAAGACA TTAAAGACTG CAATTTCTAT
ATAGTTACAG TGCCAACACC CATCGATGAA AGTAATGCAC CAGATTTGAC TCCATTAAAA
AAGGCATCCG AGGCGTTAGG TAAGGTCATT TCGCTTGATG ATATCGTGGT TTTTGAGTCT
ACAGTCTATC CAGGTGCAAC AGAGGAATAT TGTATTCCTA TAATTGAACG TGTTTCTAAT
TTGATGTTTA ATCGTGATTT TTATGCTGGT TATAGCCCAG AACGAATTAA TCCAGGTGAT
AAGGTAAATC GTTTAACAAC CATTGTGAAA ATTACTTCAG GGTCCACTCC AGAAGTGGCG
GACTTTGTCG ATGCAGTTTA TTCATCAATT GTTAGTGCGG GAACTCATAA AGCATCTTCG
ATAAAAGTTG CGGAGGCTGC CAAGGTTATT GAAAACACTC AGAGAGATCT GAATATTGCA
GTGATTAACG AATTTGCAAA AATATTCAAC CGCTTAAAAA TTGACACAGA AGAAGTTTTA
AAGGCTGCTG GTACTAAATG GAATTTTTTG CACTTTAAAC CAGGCTTGGT TGGTGGGCAC
TGCATAAGTG TAGACCCATA TTATTTAACC CATAAAGCGA AAGAGGTTGG TTATTCTCCT
GAAGTGATAT TGGCTGGGCG TAGAATAAAC GACGGTATGG GAAGCTATGT AGCTACCCAG
ATGGTTAAAA AATTAGCCAG TAAAAAAATA CACATAGACG AAGCTAACGT ACTAATAATG
GGCTTTACAT TTAAAGGTGA TTGTCCAGAT GTACGTAATA CCAAGGTTAT TGAAATAGTT
AAAGAACTCA AAAGTTTCAA TATTAACGTT GATGTCTATG ATTCTTGGGC AAATCCAGAC
GAAGTAGAAC ATGAGTATGG TATTAAGATG ATTTCTGAGC TCTTTAATGG ATACTATGAT
GGCATTATTG TTGCGGTTGA TCACTCAGAG TTTAAACAGA TGGGTATTCA AAAAGTACGA
CTTTTAGGTA GGCCTAATCA TGTGGTGTAC GATGTAAAAT ACGTATTTGG TTTGAATGAT
TCAGATATCC GTTTGTAA
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| Protein sequence | MMSLKELKIG VIGLGYVGLP LAVEFGKKYP TLGFDINELR VRELSQGRDA TLECTAEELS
EASLLKYTST LEDIKDCNFY IVTVPTPIDE SNAPDLTPLK KASEALGKVI SLDDIVVFES
TVYPGATEEY CIPIIERVSN LMFNRDFYAG YSPERINPGD KVNRLTTIVK ITSGSTPEVA
DFVDAVYSSI VSAGTHKASS IKVAEAAKVI ENTQRDLNIA VINEFAKIFN RLKIDTEEVL
KAAGTKWNFL HFKPGLVGGH CISVDPYYLT HKAKEVGYSP EVILAGRRIN DGMGSYVATQ
MVKKLASKKI HIDEANVLIM GFTFKGDCPD VRNTKVIEIV KELKSFNINV DVYDSWANPD
EVEHEYGIKM ISELFNGYYD GIIVAVDHSE FKQMGIQKVR LLGRPNHVVY DVKYVFGLND
SDIRL
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