| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2257 |
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| Symbol | |
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| ID | 4604507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2720598 |
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| End bp | 2721671 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639781654 |
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| Product | DegT/DnrJ/EryC1/StrS family protein |
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| Protein accession | YP_928132 |
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| Protein GI | 119775392 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.168217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000546181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGTTTA TTGATTTGGC CGCGCAATAT AAGCATCTGA AAGAAAAAAT TGATGCACGT
ATTCAAGCTG TGTTGGAACA TGGTCACTAT ATAATGGGAC CAGAGGTTGC TGAACTAGAA
GACAAATTGG CCGAATATGT AGGTGTAAAG CACGCTATTA CATGTGCGAA TGGCACTGAT
GCACTCACTC TTGTCATGAT GGCGTTAGGT ATAAAAGAAG GCGACGCGGT GTTTTGCCCA
ACTTTTACCT TTTTCGCAAC TGCAGAGGTC ATTGCATATG AAGGGGCGAC TCCTGTATTT
GTGGATTCAG ATGCGGATAC ATTTAATATT TGTCCCCTCG ATCTAGAAAA GCAAATTCAA
AAAGTGATTG CGGAAGGGAA ACTTAAACCG GCAGCTATCA TTGCAGTAGA TTTATTTGGT
CTTCCTGCCA ACTATCCAGA ACTTGAAAAA ATAGCCAAGC AATATGGACT TAAGCTTGTA
GAAGACGCCG CTCAAGGTTT CGGTGGTGAA ATTGAAGATA AGCGAGCGGG CTCTTTTGGT
GATATTGCAA CAACCAGTTT TTTTCCAGCA AAACCATTAG GTTGTTACGG GGATGGAGGG
GCAATATTCA CTAATGATGA CCACTATGCT GAGCTAATTA GATCGCTGCG TGTTCATGGC
AAAGGTAAGG ACAAATATGA CAATATACGT GTGGGAATGA ATAGTCGCTT AGATACTTTA
CAAGCAGCAG TACTACTTGA AAAATTAGCC GCTTTTCCGC AAGAGCTGAT TAGTAGAAAT
AAAGCTGCAA AAAGGTACTC AAGAGAGCTA AGCTCAATCT ATAAAACACC TGTAACACCA
GTAGGATATT TAAGTTCTTG GGCGCAATAT ACTGTTGTAG CCGAAGATAG AAATGCTGAG
ATAGAAATGT ACAAGAGCAA GGGGATTCCT ACCATGATTT ATTATGGCAC TTGTATGCAC
CAGCAAACTG CATTCGAAGC CTTAGGATAT CAGGATTCAG ATTTTCCCGT CGCAAGCAGA
TTAGCTAAAA CTGTATTTAG CTTACCAATG CATGGTTACA TGATGGATAA ATAG
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| Protein sequence | MQFIDLAAQY KHLKEKIDAR IQAVLEHGHY IMGPEVAELE DKLAEYVGVK HAITCANGTD
ALTLVMMALG IKEGDAVFCP TFTFFATAEV IAYEGATPVF VDSDADTFNI CPLDLEKQIQ
KVIAEGKLKP AAIIAVDLFG LPANYPELEK IAKQYGLKLV EDAAQGFGGE IEDKRAGSFG
DIATTSFFPA KPLGCYGDGG AIFTNDDHYA ELIRSLRVHG KGKDKYDNIR VGMNSRLDTL
QAAVLLEKLA AFPQELISRN KAAKRYSREL SSIYKTPVTP VGYLSSWAQY TVVAEDRNAE
IEMYKSKGIP TMIYYGTCMH QQTAFEALGY QDSDFPVASR LAKTVFSLPM HGYMMDK
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