| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2246 |
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| Symbol | |
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| ID | 4604496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2710777 |
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| End bp | 2711610 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639781643 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_928121 |
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| Protein GI | 119775381 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.155767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00775212 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAAG TTGGTTTTGT AACTTGTGTA CAACTCGGCT ACTCCTGTAT GGAGGCTATA
TATGAGGTTG GTGGTAAATT GGATTTGGCT ATATCGTTGT TAGATAATCA AGCTAAATCA
AAGTCTGGTA GGATATATTT GGACTCCTTT TGTAACTCAA AGGGTATACC TTTGCTAAAG
GCATCCCATG TAAATAATCC CGAGGTGATT CAATCAATCA AAGATGCCCA ATTGGACTGG
CTTTTTATCA TTGGCTGGTC TCAAATTGCC TCTCAGGAGG TTCTAGAAGC GCCAAAGCGG
GGCGTTCTCG GTATGCACCC AACGCTACTA CCCACTGGCC GTGGCCGCGC AGCTATTCCT
TGGGCCATTC TTAAAGGTTT ATCTAAGACG GGTGTTACCT TATTTAAATT GGATTCCGGA
GTAGACACCG GTCCAGTGGT TGATCAAATT GAAATTGCCC TAGACAATCA AGTTGATGCT
AACATTTTAT ATCAGGAAGT TGATGCTGCT CATATTAGTT TGATCAAGAA GGTAATTCCT
TCATTGATGG CAGACGATTT AGTATTAAAA GAGCAAGACG AGTCGTTAGC TACTGAATGG
CCAGGGCGTA AACCCGAAGA TGGCTTAATT GATTTAACAG GTTCAGTTTT TGATGCACAT
AGGATGGTAA GAGCTCTTAC GCGGCCGTAT CCAGGTGCAT TCTATTTCGT TGATGGTATA
AAGGTGGTCG TTTGGAAGGC AGTTATATCT AAATCTCGTC TTTCAGATAG AACCATTAAT
TTCTATGATG GACAATTACA GATTTTGGAA TATGAGTTAA TTAACGTCAA GTGA
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| Protein sequence | MIKVGFVTCV QLGYSCMEAI YEVGGKLDLA ISLLDNQAKS KSGRIYLDSF CNSKGIPLLK
ASHVNNPEVI QSIKDAQLDW LFIIGWSQIA SQEVLEAPKR GVLGMHPTLL PTGRGRAAIP
WAILKGLSKT GVTLFKLDSG VDTGPVVDQI EIALDNQVDA NILYQEVDAA HISLIKKVIP
SLMADDLVLK EQDESLATEW PGRKPEDGLI DLTGSVFDAH RMVRALTRPY PGAFYFVDGI
KVVVWKAVIS KSRLSDRTIN FYDGQLQILE YELINVK
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