| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2242 |
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| Symbol | |
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| ID | 4604492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2705086 |
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| End bp | 2706219 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781639 |
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| Product | dTDP-glucose 4,6-dehydratase |
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| Protein accession | YP_928117 |
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| Protein GI | 119775377 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
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| TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.366599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATTC TTGTTACAGG TGGCTGCGGC TTTATCGGTT CGGCGGTAAT CAGACATTTA
ATCAGTCACA CTGAACACAG CGTGGTGAAT GTCGACAAGC TAACTTATGC GGCAAATCTG
TTATCTGTCG CTGAGGCAGC AGAAAGCGCC AGATACGCGC TTGAGCGTGT CGACATCTGT
GACAGGCAGG CACTTGGGGC GGTTTTTGCT CGCCATCAGC CCGATGTGGT GATGCATCTA
GCTGCGGAAA CCCATGTCGA TCGCTCTATA ACAGGTGCGG ATGCCTTTAT CCAAACCAAC
ATAGTGGGCA CTTACACCTT GTTGGAAGTT GCCCGTGAAT ATTGGCGGCA GCTCGACGAC
ATGCGTAAAA ACGCATTTCG ATTTCATCAT GTTTCGACCG ACGAAGTATT TGGGGATCTG
GCTGACCAGG TTAATGCTGA ATGTTTGGTT GAGAATGCTG AATTGAACAC TGATGGTGCA
AGTTCACCAT TGAGCATTCA TGATTCAACG TTAAAAACAG CCGCGCCATT TACCGAAAGC
AGTGCTTATG CGCCGTCATC ACCTTATTCC GCCTCCAAGG CCTCAAGCGA TCATCTGGTT
AGGGCATGGC ACCGGACTTA TGGTTTGCCA ATCGTTGTCA GCAACTGCTC CAATAACTAT
GGGCCATTTC AATACCCGGA AAAACTCATT CCGCTGACTA TTCAAAATGC ACTGGCGGGA
AAGGCGTTAC CCGTGTATGG CCAAGGAAAC CAAAGCCGCG ATTGGCTTTA TGTGGAGGAC
CACGCACGGG CACTGCTGGC CGTAATGACC CGTGGGCGGG TAGGCGAGAC ATATAACATC
GGCGGCAATA GCGAGCGTCA AAATCTCGAG GTGGTTAAAA GCATTTGTGC GATCCTCGAT
GAGTTGGCTC CGTTGCATGA ACGCACACAG GAGCTCAATC CTCATCATGC ATCCCCCAAT
ACTCTACATT ACGAGAGTCT CATCACTTTC GTGGCCGACA GACCCGGCCA TGATGTGCGC
TACGCCATTG ATGCCAGCAA AATTACCGAG CAGCTTGGCT GGAAACCGCA GGAGACCTTT
GAATCCGGTC TGCGTAAAAC GGTTGAGTGG TATGTTCTGA ATGGTGAATG GTGA
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| Protein sequence | MKILVTGGCG FIGSAVIRHL ISHTEHSVVN VDKLTYAANL LSVAEAAESA RYALERVDIC
DRQALGAVFA RHQPDVVMHL AAETHVDRSI TGADAFIQTN IVGTYTLLEV AREYWRQLDD
MRKNAFRFHH VSTDEVFGDL ADQVNAECLV ENAELNTDGA SSPLSIHDST LKTAAPFTES
SAYAPSSPYS ASKASSDHLV RAWHRTYGLP IVVSNCSNNY GPFQYPEKLI PLTIQNALAG
KALPVYGQGN QSRDWLYVED HARALLAVMT RGRVGETYNI GGNSERQNLE VVKSICAILD
ELAPLHERTQ ELNPHHASPN TLHYESLITF VADRPGHDVR YAIDASKITE QLGWKPQETF
ESGLRKTVEW YVLNGEW
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