| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2239 |
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| Symbol | |
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| ID | 4604489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2702369 |
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| End bp | 2703274 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781636 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_928114 |
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| Protein GI | 119775374 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.562974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAGTGT TGTTGCTGGG CTCCAGCGGC CAGGTCGGCA GAGCGTTGCT GGCCTTCAAG
CCTGCAGGTT ACAAGTTACT GGTCCCAGGC AGAAGCGAAG TGGATTATTT GCAACCTGAA
TCCATCACTG ATTATGTGTT ATTTCATAAG CCGCAATTGG TCATCAACTG CGCGGCGTAT
ACTGCTGTGG ATAAGGCTGA AGCAGAGACA GCACTGTGTA CGCGAATCAA TAGCGGGGCT
TGCGAGCATC TCGCCAAGGC AGCAGCAGCG GCTGACGCCG TCCTGCTACA TCTCTCTACC
GATTATGTGT TTGATGGTCT CCTCGACCGT CCATACAACG AAGAAGACTC GCCAGCCCCT
TTGTCTGTGT ATGGACATTC CAAGTGGTTG GGAGAGCAAA CCATAGTCGC CAACTGTGCC
AAGCATCTTA TCGTCAGAAC ATCCTGGATT TTTGATGCTG ACAGTAACAA CTTCGTCAAT
ACCATGCTGC GTTTGGCGGC ATCCAGGTCA GAGCTACGGG TTGTGGCAGA CCAAGTTGGG
GGACCGACGC CCGCATCTGA ACTGGCCCGG GCGATTTGGC AACTTGCCAG GCAATCGGTG
GAGAGAAATG GCCCTTGGGG CGTCTATCAC TTTTCCGGCC AACCCTTTGT CAGTTGGTAC
GAGTTTGCCA GGAGCATTTT GACTGAGGCA TACAGGCTTT GCGTCATCCA CCAACTACCA
ACAATAACAT CTATCAGCGC CAGTGAGTTC GGCTCCCCTG CGCAGAGGCC TGCAAACTCG
AGGCTTGATG GCAGTAAAAT CAAAGCATTA TATGGGGTTG CTGCCGCAGA CTGGCAGAGT
GAGTTAGTTA ACATTCTGAA AGCCAAGGCC AGGGCCGTGA CCTCAGTTAC AAACCCTGGT
TGTTAG
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| Protein sequence | MRVLLLGSSG QVGRALLAFK PAGYKLLVPG RSEVDYLQPE SITDYVLFHK PQLVINCAAY
TAVDKAEAET ALCTRINSGA CEHLAKAAAA ADAVLLHLST DYVFDGLLDR PYNEEDSPAP
LSVYGHSKWL GEQTIVANCA KHLIVRTSWI FDADSNNFVN TMLRLAASRS ELRVVADQVG
GPTPASELAR AIWQLARQSV ERNGPWGVYH FSGQPFVSWY EFARSILTEA YRLCVIHQLP
TITSISASEF GSPAQRPANS RLDGSKIKAL YGVAAADWQS ELVNILKAKA RAVTSVTNPG
C
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