| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2237 |
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| Symbol | |
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| ID | 4604487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2701549 |
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| End bp | 2702079 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639781634 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_928112 |
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| Protein GI | 119775372 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.551559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTGT TAACCACTGC AATCAATGAA GTAAAACTTA TTATCCCCAG TGTATTTGAG
GATGAACGGG GATACTTTTT CGAAAGCTGG CAGCAGCAGC GATTTGCCGA GCTGGTCGCG
CCGGTCACCT TTGTGCAGGA CAATCAATCC TTGTCCAAAA GGGGCACCTT AAGGGGGTTG
CACTGGCAGG AAGCGCATCC GCAGGACAAG CTTATTTCAG TGCTGTCGGG CACTATATTT
GATGTGGCCG TCGATATTCG TCCCGAATCG CCCACCTATG GCAAATGGGT GGGGGAAACG
CTCTCTGCAG AAAATCACAG GCAACTCTTT ATCCCCAAAG GTTTTGCCCA CGGTTTTTAT
GTGCTGTCAG AAAGTGCCAT CGTCAGTTAC AAATGCAGCG ACTTTTATCA TCCCGAGGAC
GAGCGCAGTA TTCGGTGGGA TGACCCATCC CTCGCAATTC AATGGCCTAT TGAAGGGCTA
CCTTTACTTT CAGCCAAAGA CGCCATGGCG CCGCTTTTTA CACCTCGTTA G
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| Protein sequence | MQVLTTAINE VKLIIPSVFE DERGYFFESW QQQRFAELVA PVTFVQDNQS LSKRGTLRGL
HWQEAHPQDK LISVLSGTIF DVAVDIRPES PTYGKWVGET LSAENHRQLF IPKGFAHGFY
VLSESAIVSY KCSDFYHPED ERSIRWDDPS LAIQWPIEGL PLLSAKDAMA PLFTPR
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