| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2235 |
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| Symbol | |
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| ID | 4604485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2699039 |
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| End bp | 2700043 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781632 |
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| Product | NAD dependent epimerase/dehydratase family protein |
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| Protein accession | YP_928110 |
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| Protein GI | 119775370 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.869767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.644401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT TGGTCACAGG CGCCGCCGGA TTTATTGGCG CTGCCGCATG CAAAAGGCTG
CTTTCGCAGG GACATCAGGT TCATGGCATC GATAATCTTA ACGATTACTA CGATGTCTCT
TTGAAGCAGG CGAGGTTGGC TGCTCTCGCA TCTCATCCCC ACTTTCAATT TCAGCGAATG
GAGCTTGCCG ACCGCGGGGC GATTGCAACG CTTTTTTCGA CCATAAAGCC CGATTGGGTG
CTGCATCTTG GTGCTCAGGC GGGGGTTCGT TACTCCATCG ACAATCCCCA TGCTTATGCC
GATGCCAATT TGGTGGGGCA TCTCAATATT CTTGAAGGGT GTCGCCAAAC CGGCGTAAAG
CATCTGGTGT ATGCGTCCTC AAGCTCAGTG TACGGGCTTA ACAAAAAGCT GCCCTTCGCC
ACCAGTGACT CGGTAGATCA CCCCGTTTCC CTCTATGCGG CCACTAAAAA GGCCAATGAG
TTGATGTCAC ACAGTTATGC CCACCTTTAT GGCGTGCCCT GCACGGGGCT GCGGTTTTTT
ACCGTTTATG GACCTTGGGG CCGACCGGAT ATGGCGCCCA TGTTGTTTGC CAGGGCGATT
ATGGCAGGTG AGCCCATCAA GGTGTTTAAT CAAGGCGATA TGAGCCGCGA CTTTACCTTT
ATCGACGATA TCATTGAGGG CGTAATAGGC GTGCTGCCGC TGCCGCCAAG CACATCGTCT
CAGTGGTCGG TAGAAAGTGG CTCCAGCAGT GAAAGCTCAG CGCCTTACCG GGTACTGAAT
ATCGGCCACG GCAGCCCGGT ATCTCTGATG CACTTTATCG AAACCCTCGA AAATGCCCTT
GGCCGTAAGG CCATCAAGCA GTTTTTACCG ATGCAGGACG GCGATGTAAA AGCCACCTGG
GCGGATACAG AAGATTTGTT TGCCATCACG GGCGTGCGCC CCAAGGTGGG GATAGAGCAG
GGGGTAAAAG CCTTTGCCGA CTGGTATCTA AACTACTATC ACTGA
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| Protein sequence | MKILVTGAAG FIGAAACKRL LSQGHQVHGI DNLNDYYDVS LKQARLAALA SHPHFQFQRM
ELADRGAIAT LFSTIKPDWV LHLGAQAGVR YSIDNPHAYA DANLVGHLNI LEGCRQTGVK
HLVYASSSSV YGLNKKLPFA TSDSVDHPVS LYAATKKANE LMSHSYAHLY GVPCTGLRFF
TVYGPWGRPD MAPMLFARAI MAGEPIKVFN QGDMSRDFTF IDDIIEGVIG VLPLPPSTSS
QWSVESGSSS ESSAPYRVLN IGHGSPVSLM HFIETLENAL GRKAIKQFLP MQDGDVKATW
ADTEDLFAIT GVRPKVGIEQ GVKAFADWYL NYYH
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