Gene Sama_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2229 
Symbol 
ID4604479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2693918 
End bp2694610 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content55% 
IMG OID639781626 
Producthypothetical protein 
Protein accessionYP_928104 
Protein GI119775364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.888778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGC AAAGAAATGG ACATTTTTCC ATCGTAGCGG CCACCAAGCG AAACGGCATC 
ACCTTAACCG TAATAAGTGC ACTGCTGCTG TGTGTTTCGC TGCTGATTTT TATCACCGCC
AGACACTGGT TTGGCCCGGG CTTGGTGCTA TTTACCCTGG GGGCCGTGGG CCTGGTGCTG
GGGTATGCCA AGGTGTCACA ACCTCCCGAG TCGCTCAAAG GCGACGCCGG AGGATTGGTG
TTTTTTCATC GTAGAGGGCA ATACCGGCTT GACTGGGAGA ACATTCAGCG CATCGATGTC
CCCCGCGTAA GCCAGGGATT GGATAGCCTG GACTTGCCTT TTATCGGCAT TAAAGTTAAA
AAAATCAATC CGGTGCTTGA TAGTATCTCT CCCAGACTTG CCACCGGGCT TTTGTCCGAA
CAGCGTCCGT TATTGATGAC GGCTGCGGCG CAGGACGACA CACTCGAATC CCTTGAAACC
CAGCTTGGCG CCGAATTTAC CCCCCTGCTC ACCCATGGCG AGCGGTATCG CGGCGTGCTG
GCGATGTTTG GCCATCGCTG CCTGCTGCTG GATAAGCGGC TTGGCTATCA CCTCTATATC
CCCGCCGATG CCCTTGATGA TGAACCTGTG GTTGTTGCCA GGCGACTGAG GGAGTTCAAG
GCGCTGCAAC TCAGCCTCAG TAATCAACCC TAG
 
Protein sequence
MTEQRNGHFS IVAATKRNGI TLTVISALLL CVSLLIFITA RHWFGPGLVL FTLGAVGLVL 
GYAKVSQPPE SLKGDAGGLV FFHRRGQYRL DWENIQRIDV PRVSQGLDSL DLPFIGIKVK
KINPVLDSIS PRLATGLLSE QRPLLMTAAA QDDTLESLET QLGAEFTPLL THGERYRGVL
AMFGHRCLLL DKRLGYHLYI PADALDDEPV VVARRLREFK ALQLSLSNQP