Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2229 |
Symbol | |
ID | 4604479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2693918 |
End bp | 2694610 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639781626 |
Product | hypothetical protein |
Protein accession | YP_928104 |
Protein GI | 119775364 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.888778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAGC AAAGAAATGG ACATTTTTCC ATCGTAGCGG CCACCAAGCG AAACGGCATC ACCTTAACCG TAATAAGTGC ACTGCTGCTG TGTGTTTCGC TGCTGATTTT TATCACCGCC AGACACTGGT TTGGCCCGGG CTTGGTGCTA TTTACCCTGG GGGCCGTGGG CCTGGTGCTG GGGTATGCCA AGGTGTCACA ACCTCCCGAG TCGCTCAAAG GCGACGCCGG AGGATTGGTG TTTTTTCATC GTAGAGGGCA ATACCGGCTT GACTGGGAGA ACATTCAGCG CATCGATGTC CCCCGCGTAA GCCAGGGATT GGATAGCCTG GACTTGCCTT TTATCGGCAT TAAAGTTAAA AAAATCAATC CGGTGCTTGA TAGTATCTCT CCCAGACTTG CCACCGGGCT TTTGTCCGAA CAGCGTCCGT TATTGATGAC GGCTGCGGCG CAGGACGACA CACTCGAATC CCTTGAAACC CAGCTTGGCG CCGAATTTAC CCCCCTGCTC ACCCATGGCG AGCGGTATCG CGGCGTGCTG GCGATGTTTG GCCATCGCTG CCTGCTGCTG GATAAGCGGC TTGGCTATCA CCTCTATATC CCCGCCGATG CCCTTGATGA TGAACCTGTG GTTGTTGCCA GGCGACTGAG GGAGTTCAAG GCGCTGCAAC TCAGCCTCAG TAATCAACCC TAG
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Protein sequence | MTEQRNGHFS IVAATKRNGI TLTVISALLL CVSLLIFITA RHWFGPGLVL FTLGAVGLVL GYAKVSQPPE SLKGDAGGLV FFHRRGQYRL DWENIQRIDV PRVSQGLDSL DLPFIGIKVK KINPVLDSIS PRLATGLLSE QRPLLMTAAA QDDTLESLET QLGAEFTPLL THGERYRGVL AMFGHRCLLL DKRLGYHLYI PADALDDEPV VVARRLREFK ALQLSLSNQP
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