| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2225 |
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| Symbol | |
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| ID | 4604475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2688907 |
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| End bp | 2689404 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639781622 |
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| Product | ferredoxin-type protein NapF |
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| Protein accession | YP_928100 |
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| Protein GI | 119775360 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR00402] ferredoxin-type protein NapF |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000128219 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAGA ACATTAATTT AAGTCGCCGC CGACTCTTCA GTCGCCGCAA GGACAACGCC
CTGCGGCCAC CCTTTGTGCG CGATGATGTG GAGTTTACTG ACCTGTGCAG CCGCTGCGGT
GACTGCATAA CGGTGTGCGA GACAAAAATC ATCGTCAAGG GAGAGGCAGG ATTCCCCGAA
GTTCGCTTCG ACAACGCCGA GTGCACTTTC TGCGGGGAAT GCGCCAAGGT CTGTCCCGAG
CCCATCTTTT CCCTCGATAA GTCCCCACCT TGGACTCTGG AGGCGAGTAT CCAGGAGTCG
TGCCTCGCTC ACCGGGGCAT TTGGTGCCAA AGCTGCAAAG ATGCCTGCGA TGTCAGTGCC
ATCCGCTTCA CCCCGACTCT GGGCCGTGCG CCCACGCCGG AATTATTGCT GGATGCTTGC
ACCGGCTGCG GCGCCTGTGT GGCCCCCTGC CCGGCCGATG CCATTGTGAT GATAAAACCC
CAGACCACGC CTCAGTAA
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| Protein sequence | MKENINLSRR RLFSRRKDNA LRPPFVRDDV EFTDLCSRCG DCITVCETKI IVKGEAGFPE
VRFDNAECTF CGECAKVCPE PIFSLDKSPP WTLEASIQES CLAHRGIWCQ SCKDACDVSA
IRFTPTLGRA PTPELLLDAC TGCGACVAPC PADAIVMIKP QTTPQ
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