| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2212 |
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| Symbol | |
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| ID | 4604462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2673300 |
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| End bp | 2675102 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781609 |
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| Product | putative two-component sensor histidine kinase protein |
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| Protein accession | YP_928087 |
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| Protein GI | 119775347 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGA CAGCGCAAAT TCATCGACGC CTTCGTTACA CCCTGCTCGC CCTCGTAGGC
CTGGTGGGCG TGTTATATCT GACCTGGAGC TGGCATGTAC GAAGTGGCGT GTCAGATCTG
GCCGACACCT CCCGCGCTCA GCTGGGTGAG CTGGTCAGCC TGCTCGATGG CATGCTGTCG
CGCTTTGAAA CCATTCCCCA CGTGTTGTCG ACCAACCCCA TGCTGGCCGA TACCCTGCTC
AACCAACGCG ACATGGACAA GGTCCACAGA CTCAATAAAT ACCTCGAGGA GCTAAGGCAT
ATTACCGAGG CCTCCGACAT TTACCTTATC GATGCCCTTG GGGTTGCCGT TGCCGCCAGC
AACTGGCAGC AATCCTATTC ATTTGTTGGT CAGGATTATT CGTTCAGGCC TTACTTCACC
GAGGCCATCG CCGGGCGTCA GGGCAATTAC TATGCGGTGG GAACCGCTTC TGATAAGCGG
GGCTATTACT TTTCTTTTCC GGTGGAAGAC AGCGGCACAG TACTTGGCGC CATCGTGGTG
AAACTGGACG TGCTGGACAT TGAAACCCAG GCCTCAGGGG TCGCACAGGC GGGTCAGTAT
GACTTTATTA TCACGGATCC CGATAACATA GTCTTTGCCT CCAACAGGGC CGAATGGCGA
CTTACGTCAC TGGGCCCCTT CACCGACAGC AAACGCTACG CCCTCAATGC CAGTAAAAGG
TACGCAAAGC GACAAATCAC AGAGCTGGAT ATTCATCCGG CTTACAAGGG GGTCACCGAA
GGCGTCAATG CCTATCGGAT TGGCAGCGGG CTCAAAGCAG CAGACTATCT CGACACCTCA
ACTGCCATGA TCAAGGCAGG TTGGCGTGTG CACGTATTGA CGCCACTGGC ACCCGTGTAT
AGCTCCTTGT CGCAGGTGCT GCTGCTGTCT GCCACCTGCT ATGGTCTGCT GCTGCTTTTT
ACCCTGCTGC AGCGGGAGCG TCGCCACAGC CTGGCCAGAA TGCAGCAATC CCGCGATGAG
CTGGAACAAC GGGTGAAAGA GCGCACCGCC GAGCTTGAAG CGGCAAACAC CCAGCTCAAA
GATACCCAGG ATGAGCTTAT TCAGGCCGCC AAGCTAACGG TAGTCGGCAC CATGTCGGCC
AGTATCAACC ATGAGCTCAA TCAGCCGCTG GCGGCCATTC GAAGCTATAC CCAAAACACC
CAAACCTTTT TGGAACGGGA TATGCCCGGC CGTGCCCGAG AAAATCTGGC GATTATTCTT
GAGCTTACCG ACCGACTCGC CGACATTGTC GGCCAATTTA AAAGCTTTAC CCGCAAAAGC
CAGGGCAAAG ACGGCGTGGT TATGCTCGCC AACTGCTTAC AGCAGGCCCT GACCATAGTG
CAGCCCGAAC TGGACAAACA AAAAGCCCAA CTGACGATCC ACTGTGAGGA TGAATCCCTC
AAAGTCTGGT GCGACGGCAC CCGCCTGCAG CAGGTGCTGG TTAACCTCAT CACCAACGCC
CTGAATGCCA TGTCGCAAAG CCCGGTGAAG CGTCTGTCCA TCAGTTTACT CGGGGGCGAT
CCCGTCACCA TACGCATCCA GGACTCAGGC CCCGGGGTGC GTGACAGCCT GATGGAAAAA
ATCTTTGAGC CCTATTACAC CACCAGCGAG CGGCAGGGGC TGGGGCTCGG GCTGTCTATT
TCGCGCCGTA TTATCGAATC CATGCAAGGG GATATCCGGG TCGCCAACGC GCCTGAGGGC
GGTGCCATCT TCGATATCAC TCTGCCCGCT TATTTAGCCG ACAAGGGACA ATATGAGTCT
TGA
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| Protein sequence | MQMTAQIHRR LRYTLLALVG LVGVLYLTWS WHVRSGVSDL ADTSRAQLGE LVSLLDGMLS
RFETIPHVLS TNPMLADTLL NQRDMDKVHR LNKYLEELRH ITEASDIYLI DALGVAVAAS
NWQQSYSFVG QDYSFRPYFT EAIAGRQGNY YAVGTASDKR GYYFSFPVED SGTVLGAIVV
KLDVLDIETQ ASGVAQAGQY DFIITDPDNI VFASNRAEWR LTSLGPFTDS KRYALNASKR
YAKRQITELD IHPAYKGVTE GVNAYRIGSG LKAADYLDTS TAMIKAGWRV HVLTPLAPVY
SSLSQVLLLS ATCYGLLLLF TLLQRERRHS LARMQQSRDE LEQRVKERTA ELEAANTQLK
DTQDELIQAA KLTVVGTMSA SINHELNQPL AAIRSYTQNT QTFLERDMPG RARENLAIIL
ELTDRLADIV GQFKSFTRKS QGKDGVVMLA NCLQQALTIV QPELDKQKAQ LTIHCEDESL
KVWCDGTRLQ QVLVNLITNA LNAMSQSPVK RLSISLLGGD PVTIRIQDSG PGVRDSLMEK
IFEPYYTTSE RQGLGLGLSI SRRIIESMQG DIRVANAPEG GAIFDITLPA YLADKGQYES
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