| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2206 |
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| Symbol | |
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| ID | 4604456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2664098 |
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| End bp | 2665936 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781591 |
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| Product | ABC transporter, ATP-binding/permease protein, putative |
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| Protein accession | YP_928081 |
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| Protein GI | 119775341 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.52947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGAC TCTTTCAACT TTTTGAGCGC TGGACTCCAG CATTACCGGA CACAGACGCG
ACCAAGCCAC CCTCTGGCTT ATTCGCTTTT TGTAGACACT ATACGCGTGG ATTTGAAATA
CCACTGATCA GCATGTCGCT GCTGACAGCG CTGCTTGCGG CGCTTGAAGT ATCGCTTTTT
GGTTTTATGG GGCAGTTGGT GGATTGGCTG GTGAATAAAG ACCCAGCTAC CCTGCTGCAG
GACGAAGGCA AAACGCTGCT TGGCATGACG TTACTGGTAC TGGTGGCAAT TCCGCTGTTG
GTGCTACTGC ACGCCCTGAT TGCTTATCAA AGCCTCCTTG GCAACTATCC CATGTCTATC
CGCTGGCTGG CACACCGCTA CCTGCTCAAG CAAAGCATTG GTTTTTATCA GAATGAATTT
GCAGGCCGGA TTGCCACCAA GGTGATGCAG TCAGCGCTCG CGGTGCGTGA AACCGTGATG
AAGCTGCTCG ATGTCGCCGT GTATATTCTG GTGTACTTCA CCTCGATGCT GGTGATCATA
GCCCAAAGCG ACTGGCGATT GATGATGCCG ATGCTGGTAT GGCTGTGTTT CTATGTGGCA
CTCCAGTGGT ATTTCATTCC CAGACTGAAA AGGGTATCAA CCGAGCAGGC AGATGCCCGC
TCAACCATGA CAGGCCGCAT TGTCGACAGC TATACCAATA TTTCCACCGT GAAACTCTTT
TCCCATACCC AGAGAGAAGC GGACTACGCC CGTGACGCCA TGGGCAGCTT CCTGGACACT
GTATACCGGC AAATGCGTTT GGTGACCGGG CTTAATGTCA GTGTACAGGT CATCAACTAC
ATGTTGGTGT TCGCCGTTGC GGCAATCGCC ATTCTGTTAT GGACAGAGCA AGCCATCACC
ATAGGTGCCA TCGCCATCGC CGTGAGTTTG GCGCTGCGCC TCAATGGTAT GAGCCAGTGG
ATCATGTGGG AAGTGAGTTC ACTGTTTGAA AACATAGGCA CTGTGGTGGA TGGGATGAAT
ACCCTCTCCA AACCGACCCA AATTGAAGAC GCGCCGACTG CAAAGGCTCT GCAGGTCAAC
AATGGAGCTA TTCACTACAA AGACGTGAGC TTTCATTATG GCGAAGGCAG CGGTGTGATT
GACGGACTTG AGCTCAATAT TCGCCCCGGT GAAAAAGTGG GACTCGTGGG CCGCTCTGGC
GCAGGTAAAT CCACCATGGT GAATCTGTTG ATGCGCTTTT ATGATGTGGA GCGCGGCGAG
ATACTCATCG ATGGTCAGCC CATCAATGAA GTGACTCAGG ACTCGCTGCG GGCTCATATC
GGAATGGTGA CCCAGGATAC CTCGTTGCTG CACCGCACTA TTCGGGAAAA TATTCTCTAC
GGTCGCCCGG ATGCGACAGA AGATGAGCTC AATAAGGCTA TCGACAGGGC TCAGGCAAGA
GAATTTATCG AGCAGCTCAG TGACCCATCC GGTAACCACG GTTTGGATGC CATGGTGGGC
GAACGGGGAG TAAAGCTCTC CGGCGGACAG CGTCAGCGCA TTGCCATCGC CCGGGTACTG
CTGAAAGACG CACCTATTCT GATTTTAGAT GAAGCCACCT CGGCACTGGA CTCAGAAGTA
GAGGCGGCCA TTCAGGAAAG CCTATATCAG CTAATGGAAG GGAAAACTGT GATTGCCATT
GCCCACCGTT TATCAACCAT TGCCGCCATG GACAGACTTA TCGTGCTCGA TGAAGGCAAA
GTCGTAGAGC AAGGCAGCCA TAAGGAACTC GTGGCTCACG GCGGTATATA CGCTCAGCTG
TGGGCCCATC AGACCGGTGG TTTCCTCGGG ACTGAGTAG
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| Protein sequence | MIRLFQLFER WTPALPDTDA TKPPSGLFAF CRHYTRGFEI PLISMSLLTA LLAALEVSLF
GFMGQLVDWL VNKDPATLLQ DEGKTLLGMT LLVLVAIPLL VLLHALIAYQ SLLGNYPMSI
RWLAHRYLLK QSIGFYQNEF AGRIATKVMQ SALAVRETVM KLLDVAVYIL VYFTSMLVII
AQSDWRLMMP MLVWLCFYVA LQWYFIPRLK RVSTEQADAR STMTGRIVDS YTNISTVKLF
SHTQREADYA RDAMGSFLDT VYRQMRLVTG LNVSVQVINY MLVFAVAAIA ILLWTEQAIT
IGAIAIAVSL ALRLNGMSQW IMWEVSSLFE NIGTVVDGMN TLSKPTQIED APTAKALQVN
NGAIHYKDVS FHYGEGSGVI DGLELNIRPG EKVGLVGRSG AGKSTMVNLL MRFYDVERGE
ILIDGQPINE VTQDSLRAHI GMVTQDTSLL HRTIRENILY GRPDATEDEL NKAIDRAQAR
EFIEQLSDPS GNHGLDAMVG ERGVKLSGGQ RQRIAIARVL LKDAPILILD EATSALDSEV
EAAIQESLYQ LMEGKTVIAI AHRLSTIAAM DRLIVLDEGK VVEQGSHKEL VAHGGIYAQL
WAHQTGGFLG TE
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