Gene Sama_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2203 
Symbol 
ID4604453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2661210 
End bp2661686 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID639781588 
Producttyrosine-specific protein phosphatase, putative 
Protein accessionYP_928078 
Protein GI119775338 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACC TGTTTTGGAT GGTTGAAGGG GTACTTGCCG GACGCTGTGG CCCTTGTTGT 
CAGCCCTGGG ACCTGGGTGA ACTCAAAGCT GTTGGTATAG GCGCTGTGGT GAGTCTGTCC
GATGATGCGG GCGATCCCGA TGCGCTCGCC AGGGCGGGTA TTGCCCATTT GCACCGCCCT
ATTAAACGGA ATGTTCCGCC GTTGGCAGAA GACGTCTCTC GGGCTGGTGA GGCCATTAGT
GAAGCGCTTG CCTGGGTACT TGAGATGGAA GCTGCGCAGA CTCCTGTGCT GGTGCACTGT
GCCTTGGGTA ATGACAGAAC CGGCTTACTC ATGGCCGCGT ATCTGATGGC GCGGGGGGCC
GCGCCTGTTC ATGCGGTCAG TCAGGTTCGC AGCTTACGGG AGCAGGCCTT CACGGCCGAA
GGTTGGGATC AATTAGTTTA CGACGTGTTA TATTCAATGC AGAATGAATC CAATTGA
 
Protein sequence
MKHLFWMVEG VLAGRCGPCC QPWDLGELKA VGIGAVVSLS DDAGDPDALA RAGIAHLHRP 
IKRNVPPLAE DVSRAGEAIS EALAWVLEME AAQTPVLVHC ALGNDRTGLL MAAYLMARGA
APVHAVSQVR SLREQAFTAE GWDQLVYDVL YSMQNESN