Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2203 |
Symbol | |
ID | 4604453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2661210 |
End bp | 2661686 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781588 |
Product | tyrosine-specific protein phosphatase, putative |
Protein accession | YP_928078 |
Protein GI | 119775338 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACACC TGTTTTGGAT GGTTGAAGGG GTACTTGCCG GACGCTGTGG CCCTTGTTGT CAGCCCTGGG ACCTGGGTGA ACTCAAAGCT GTTGGTATAG GCGCTGTGGT GAGTCTGTCC GATGATGCGG GCGATCCCGA TGCGCTCGCC AGGGCGGGTA TTGCCCATTT GCACCGCCCT ATTAAACGGA ATGTTCCGCC GTTGGCAGAA GACGTCTCTC GGGCTGGTGA GGCCATTAGT GAAGCGCTTG CCTGGGTACT TGAGATGGAA GCTGCGCAGA CTCCTGTGCT GGTGCACTGT GCCTTGGGTA ATGACAGAAC CGGCTTACTC ATGGCCGCGT ATCTGATGGC GCGGGGGGCC GCGCCTGTTC ATGCGGTCAG TCAGGTTCGC AGCTTACGGG AGCAGGCCTT CACGGCCGAA GGTTGGGATC AATTAGTTTA CGACGTGTTA TATTCAATGC AGAATGAATC CAATTGA
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Protein sequence | MKHLFWMVEG VLAGRCGPCC QPWDLGELKA VGIGAVVSLS DDAGDPDALA RAGIAHLHRP IKRNVPPLAE DVSRAGEAIS EALAWVLEME AAQTPVLVHC ALGNDRTGLL MAAYLMARGA APVHAVSQVR SLREQAFTAE GWDQLVYDVL YSMQNESN
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