| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2202 |
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| Symbol | |
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| ID | 4604452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2659662 |
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| End bp | 2661188 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781587 |
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| Product | phopholipase D-family protein |
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| Protein accession | YP_928077 |
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| Protein GI | 119775337 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.908196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAC GTGTTTCCTG GCGTTCATTT TGGCTGATGA TCCTCGGATG TATCTCACTC
GGGGGTTGCA GTAGTCTGCC TGAACTTAAA GATGCACCGC GGAGTTACAA GCTGACATCG
GCGCCGGATA GCCTGATAGC CGGATACCTG GCAGAGCCAC TGGCCGGTCA CCCGGGGCAA
AGTGGCGTGT TGCCCCTGTT TGAGGGGCTG GATGCCATGG TGGCCAGGTT GGCGCTGATA
AAGTCCGCCG AAACCAGCAT CGATTTGCAA TATTACATCT TTCGCAACGA TGACACTGGG
CGACTTCTGG CCTGGCAGCT GCTGGATGCA GCAGACCGAG GCGTACGGGT ACGTTTGCTG
CTGGACGATA CTGCCAGCGT CAATATTGAC CGGCAGTTGG CGGTCATGGC GAGCCACCCG
AATGTCTCCG TCAGGCTCTA CAATCCATCG TCTCATCGCA CCCTCAGGGC CTTGTCGTTT
GTCACCGATT TCGGTCGCAT GAATCATCGC ATGCACAACA AATCACTGAC GGTGGATAAT
CGCCTCAGCG TGGTGGGCGG GCGCAATATC GGCAACGAAT ATTTCTCCAA TGACGAAGAT
GTAGAGTTTG GCGATCTCGA CGTGTTGTTG ACCGGACCGG TGGTAGAGCA GGTCTCTGAC
CAATTTGATG CCTATTGGAA TGGCAGCAAC ACCTATCCGG TCGAGCTTCT GACCGAGCAT
CCCGTACAGT CCGATGAGCT CGCAGCCATG TATGACCAGA TTGCCAACCA GAAGCGCCAG
CTTGAGGAGC ATCCCTATAT ACAGCGCCTC ACCAAGTCGC CGCTGCTCAG ACACATGGCG
GACAATCGTC TGGAATGGTT TTGGGGGGAG GCGAAAGTTC TTGCCGATCC TCATGATAAG
CGAGAAGGGC AAGCGGAAGC CTGGATGATC ACGCCCTTGC TAGATGAGTT TCAGCAAACC
CGGGAGCGCC TGGTTATCAT TTCGCCTTAC TTTGTTCCCA CAACAGAGGG CGTCAGATTG
CTTACCGGGC TTGCCAAGCG CGGTGTCGCG GTAACCGTGA TCACCAATAG CCTGGCTGCC
ACCGACGTGC TGGCGGTTCA TTCCGGTTAC AAGGGATATC GTGAGGCACT CCTTCGCGCG
GGAGTTTCCC TGTATGAAGT GAAAGCGACC GGCAAGCGCC CGAGTCATTC CTGGAAAGGC
AGCTCCCGCT CCAGTTTGCA TGCCAAGAGC TTTTTGTTTG ACGATGACAG GCTCTTTGTC
GGCTCCTTTA ATTTTGATCC GCGTTCGGCC TGGCTTAATA CTGAAATGGG GGTCATGGTT
AATCAGGGGG AGCTGAATCA GAAAATTCAT GCCTGGCTGC CCCAGTTTTT AACCAACAAA
ACTTACCAGG TGAAGCTTGG CAGCGATGGC CTCTACTGGC ATGAACTCAG TTCGGGAAAA
GATATTTATG CCGAGCCCCA GGCCGGATTT TGGCGCCGCT TTATGGCCGA TGTGCTGGCG
CTGTTTCCAC TGGAATCCCA GCTTTAA
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| Protein sequence | MPPRVSWRSF WLMILGCISL GGCSSLPELK DAPRSYKLTS APDSLIAGYL AEPLAGHPGQ
SGVLPLFEGL DAMVARLALI KSAETSIDLQ YYIFRNDDTG RLLAWQLLDA ADRGVRVRLL
LDDTASVNID RQLAVMASHP NVSVRLYNPS SHRTLRALSF VTDFGRMNHR MHNKSLTVDN
RLSVVGGRNI GNEYFSNDED VEFGDLDVLL TGPVVEQVSD QFDAYWNGSN TYPVELLTEH
PVQSDELAAM YDQIANQKRQ LEEHPYIQRL TKSPLLRHMA DNRLEWFWGE AKVLADPHDK
REGQAEAWMI TPLLDEFQQT RERLVIISPY FVPTTEGVRL LTGLAKRGVA VTVITNSLAA
TDVLAVHSGY KGYREALLRA GVSLYEVKAT GKRPSHSWKG SSRSSLHAKS FLFDDDRLFV
GSFNFDPRSA WLNTEMGVMV NQGELNQKIH AWLPQFLTNK TYQVKLGSDG LYWHELSSGK
DIYAEPQAGF WRRFMADVLA LFPLESQL
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