| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2195 |
|---|
| Symbol | |
|---|
| ID | 4604445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2654142 |
|---|
| End bp | 2654735 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 639781580 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_928070 |
|---|
| Protein GI | 119775330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0492797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTC TAGCACACTT GCACCTGGCA GATATCAGCC AAACGAGCCT TGCGGCCAAC
CTTGCCGGCG ACTTTGCCAA AGGCCCCATC GACCAGTTCA CCAAACCACT GCAACAGGGA
TTGTGGCTGC ATCGGCAAAT CGACAAAATC ACCGATGAGC ATGAGATCTT CAAAGACATG
CTGGCCAAAT TCCCCCGGCA TTTAAGTCGA GCGGCCCCTT TACTGATTGA TTTAGGTTTC
GATCATCGCC TGGCCAGGGA CTGGGAAGAG TATCACCATG AGACGTTGGA TATCTTCTGC
CAGCGTGCCT ATGAGGTGCT TCGTACCTGT GACCATTTGC CGCCAAAGCT TGCCGCCATC
GCCCCCAGAA TGTGTGATGA AGACTGGTTG GGCGCCTATG GTAGTCGCAG TGGGATCAAC
GCCGCCATTG CCGGTGTTAG GCGAAGACTC TCGCGCCCCG AGATTTTCGA TGGTGCCGAA
GCGGCCGTTG AACAGCTCGA CATGGAGTTG GAGATTGCGT TTCGCACCCT GTATCCGCAG
CTGATGGCTT ATTCCAGACG TCTGGCCCGC ACCACACCAG AGCAATACCT GTAA
|
|---|
| Protein sequence | MNFLAHLHLA DISQTSLAAN LAGDFAKGPI DQFTKPLQQG LWLHRQIDKI TDEHEIFKDM
LAKFPRHLSR AAPLLIDLGF DHRLARDWEE YHHETLDIFC QRAYEVLRTC DHLPPKLAAI
APRMCDEDWL GAYGSRSGIN AAIAGVRRRL SRPEIFDGAE AAVEQLDMEL EIAFRTLYPQ
LMAYSRRLAR TTPEQYL
|
|---|
| |