| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2193 |
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| Symbol | tgt |
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| ID | 4604443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2651342 |
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| End bp | 2652466 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781578 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_928068 |
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| Protein GI | 119775328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0616046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0257357 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AATTGATTAC TACCCAGGGT CGCGCCCGTC GCGGCAGACT GGTTTTCGAG
CGTGGCACGG TAGAAACCCC GGCCTTTATG CCTGTGGGTA CCTACGGCAC AGTCAAGGGC
ATGACCCCGG AAGAAGTGCG TGCTACCGGC GCCGATATCC TGCTTGGCAA CACCTTCCAT
CTGTGGTTGC GCCCCGGTGA AGAAATCATG CGCAAGCACG GCGATCTGCA CGACTTTATG
AACTGGCAGC GTCCTATTCT CACCGACTCG GGCGGTTTCC AGGTATTCAG CCTTGGCGAT
ATCCGTAAGA TCACCGAGGA AGGTGTGCAT TTCCGCTCGC CCATCAACGG CGAAAAGATT
TTTATGGATG CCGAAAAGTC GATGCAAATC CAGCACTCGC TCGGCAGTGA CGTAGTGATG
ATTTTCGATG AGTGCACGCC CTATCCGGCG ACGCACGACG AAGCGCGCAA GTCCATGCAG
ATGTCGCTGC GCTGGGCCAA GCGCTCTCGC GATGAGTTTG ATCGCCTCGA AAACCCCAAC
TCTCTTTTTG GGATTATTCA GGGCAGCGTG TACGAAGATT TGCGTGACGA GAGCCTAAAA
GGGCTTCTCG AAATCGGTTT TGACGGTTAT GCCGTCGGTG GTCTGGCGGT GGGTGAGCCC
AAGGAAGACA TGCACAGAGT GCTTGAGCAT GTGTGTCCGC AAATCCCGGC CGACAAACCA
CGTTATCTGA TGGGGGTAGG TAAACCGGAA GATTTGGTTG AAGGCGTGCG TCGTGGTGTC
GACATGTTCG ACTGTGTAAT GCCCACCCGT AATGCCCGCA ACGGTCATCT GTTTACCAGC
GAAGGTGTTA TCAAAATTCG CAATGCGCGT CATCGTGATG ACACATCGCC ACTCGATCCT
AAATGTGATT GCTATACCTG CACCAATTAT TCCCGTGCGT ATTTGCATCA TTTGGATCGT
TGCAACGAAA TCCTCGGAGC CAGGCTCAAT ACCATTCACA ACCTGCGTTA TTACCAAAGG
TTGATGGAGG GTTTGCGCGG CGCCATTGAG ACGGGTACAT TAGACGCCTT TGTTGCGGAC
TTCTATACCA GTCAAGGGCG TGAAGTTCCT GAGTTAAAAG ACTAA
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| Protein sequence | MKFELITTQG RARRGRLVFE RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FMDAEKSMQI QHSLGSDVVM IFDECTPYPA THDEARKSMQ MSLRWAKRSR DEFDRLENPN
SLFGIIQGSV YEDLRDESLK GLLEIGFDGY AVGGLAVGEP KEDMHRVLEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDP
KCDCYTCTNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMEGLRGAIE TGTLDAFVAD
FYTSQGREVP ELKD
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