| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2192 |
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| Symbol | yajC |
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| ID | 4604442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2650980 |
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| End bp | 2651315 |
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| Gene Length | 336 bp |
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| Protein Length | 111 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781577 |
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| Product | preprotein translocase subunit YajC |
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| Protein accession | YP_928067 |
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| Protein GI | 119775327 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1862] Preprotein translocase subunit YajC |
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| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0011264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00792113 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTATTT CTAACGCGTA TGCCAATGCA GCCGGTGCAG CACCCCAGGG TGGCGGTACC
ATGGAACTTG TGATCATGCT GGGCCTGTTT GGCCTGATCT TCTACTTTAT GATCTTCCGT
CCTCAGTCCA AGCGCGTCAA AGAGCACAAG GCACTGATGT CTTCCCTGTC CAAGGGCGAT
GAAGTACTCA CCAGCGGTGG CATCCTCGGT AAAATCGCCA AGATTACCGA AGACAGTGAC
TACGTACTGC TGGCGCTGAA TGACAGCACC AACATCACCA TCAAAAAGGA CTACATCGCA
GCGGTATTGC CAAAAGGCTC TATCCAGTCC CTGTAA
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| Protein sequence | MFISNAYANA AGAAPQGGGT MELVIMLGLF GLIFYFMIFR PQSKRVKEHK ALMSSLSKGD
EVLTSGGILG KIAKITEDSD YVLLALNDST NITIKKDYIA AVLPKGSIQS L
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