| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2187 |
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| Symbol | |
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| ID | 4604437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2646275 |
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| End bp | 2647186 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781572 |
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| Product | precorrin-2 oxidase / ferrochelatase |
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| Protein accession | YP_928062 |
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| Protein GI | 119775322 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00312119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCAATATT TTCCCCTGTT TGTTGATACC CGCGATCGCT CGGTTCTGGT GGTGGGGGGC
GGTGATGTGG CCGCCCGTAA GCTGGAGCTG CTTTGCCGCA CTGACGCGCT GATCACCGTT
ATTGCCACTG AAGCCTGTGC TGAGATCCAG GCGCAAAAAC GCAGCGGCCG CATTACGCTC
CATGAGCGCC CCGTCAACGA GGATGATATT TGCGATTGGG ATTTGCTGTA CCTGGCCACC
AATGACGAAT CGCTGAATGT GCGTCTTGCC GGAGTTGCCA GGCGCCGGAA TATTTGGGCA
AATGTGGTAG ACAACCCAGC GTATTGCGAC TTTATCACGC CCTCCATCGT CGACCGTGGC
CGCCTGGTTG TCGCCATCAG TACGGCTGGC GCCGCCCCTG TGTTTGCCAG AGACATTCGG
GCACGCCTGG AAGCCTGGCT GCCGCCCTCA CTGACGCCCC TGTTCGACTT TATTGCGACG
CGGCGGCAAC AGGTACAGGA AACCCTTGCC ACAGTGCCAG CCCGTCGACG TTTCTGGGAG
CGGTTTTTTG CCCTCAACGG AGACAGATTT GATGCTCAGA CAGAGCTTCA TTTCGAAGAT
GCGTTTTTGT CCCTCGATGG TCAGGGCGAG CTGCTGCTGA TTGATGAGGA TACTTCACCG
AGGCTGTTGC CCATTGCCGC CATGGCCATG TTGCAGCGCC TCGATATTAT TGAAACCGAC
GCCAGTCTGC CGACAGAGCT CAATGAACTG CTCAGACGTG ACGCCGAGCG CAGGCCACCT
TCTTCTTTCG CTGCTCTGGA CAAGTCGCTG GAAACGGGTA AACGTGTGCT GGTATACGCT
GATTCGGCCC AGATAAAGGC GCTGCGGGCC CATTTCCCTC AGGCCAGGCA TCTGAGGCCT
GGCGCGCTTT AA
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| Protein sequence | MQYFPLFVDT RDRSVLVVGG GDVAARKLEL LCRTDALITV IATEACAEIQ AQKRSGRITL
HERPVNEDDI CDWDLLYLAT NDESLNVRLA GVARRRNIWA NVVDNPAYCD FITPSIVDRG
RLVVAISTAG AAPVFARDIR ARLEAWLPPS LTPLFDFIAT RRQQVQETLA TVPARRRFWE
RFFALNGDRF DAQTELHFED AFLSLDGQGE LLLIDEDTSP RLLPIAAMAM LQRLDIIETD
ASLPTELNEL LRRDAERRPP SSFAALDKSL ETGKRVLVYA DSAQIKALRA HFPQARHLRP
GAL
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