| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2182 |
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| Symbol | |
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| ID | 4604432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2638770 |
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| End bp | 2641991 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781567 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_928057 |
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| Protein GI | 119775317 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.139177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0189713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCG AAAACCTCCA ACAGCTAGGG ATTTCAGGCC GCATCGCCCG CGCGTTTCAG
GCCAGTGCCA TCACACCGCT GCTGGCGCTG TTGGCACTGC TTCTGGGGAT GTTTGCCGTG
ATGGTGACCC CAAAGGAAGA AGAGCCACAG ATTGATGTGA CCTTCGCGGA TGTGTTTATC
CCCTTCCCCG GCGCTACACC TGCGGAAGTG GAGCATTTGG TTACCCTGCC AGCAGAGCAG
GTTATTTCTG AAATCAAAGG GATAGATACC CTTTACTCCT TCTCACAACC CGATGGCGCG
CTCATCATTG CCATCTTCGA AGTGGGTGTA AAACGCAACG ATGCCATAGT CGCGCTTTAT
AACCAGATTT ATTCGAATAT GGACAAGCTC CCACGTGGCG CCGGTGTGGG AGAGCCTCTG
ATTAAGCCCC GAGGTATCGA TGATGTGCCT ATCGTCAGTC TGACCCTGTG GTCAGAGGCG
CAGGACATCA CCCCCGAACA ACTGACTCAT GTTGCCCGTG GACTGGAGAC AGAACTTAAG
CGCATTCCCG GCACCCGAGA GATCTACACC CTCGGACAGC ATGAGTTGGT TCTCAATGTG
CGTATCGACC CGGCCGCCCT GTCGGCCTAC GGTCTGAGCT ACAGCGACAT CAACCGCGCC
CTCTCCGGTA ACAACCAAAT TTCCATGCCG GTACCACTGA TCCAGGACAA TCAGGAGATC
AAGGTACAAA CAGGCCAGTT CTTAAGACGT CTGGAGGATG TTCAGGAGTT GGTGGTGGCG
GTGCGTCAGG GCGCCGATGG CTACAGCGAA CCGGTTTACC TCGCGGATCT GGCCGAAGTC
ACCCTGAAAA GCGACCTGCC ACGGGCTCAG GTTCAGCACG TCACCAAAGA TGGCAGCTAT
CCAGCAGTCA CCCTTGCCAT CGGCAAGCAG ACCGGCATGA ACGCGGTGGA CATTGCCGAC
GCCGTGATTG AGCGTATGGG AGCGCTGGAA AACACCCTGC TGCCTGCCAA TGTACACGCC
ACTGTGTCGC GCAACTACGG CGATACCGCG GCCGACAAGT CCAATACCCT TATTTTCAAA
CTGATATTTG CTACCACAGC GGTGGTGATC CTGGTGCTCT TTACCATGGG GATGCGTGAA
GCCCTGGTGG TGGGCATTGC AATTATCATC ACACTGGCAC TGACCTTGTT TGCCAGCTGG
GCCTGGGGCT TTACCCTCAA CCGGGTGTCG TTGTTCGCAC TCATTTTCTC CATCGGGATC
CTCGTGGACG ATGCCATTGT GGTGGTGGAG AACATTCACA GGCACATGAG TATGGGTAAA
CGCTCGCTGC GTGAACTCAT TCCCGTTGCC GTTGACGAAG TGGGTGGCCC GACTATCCTC
GCCACCTTCA CCGTGATAGC TGCCCTGCTC CCCATGGCCT TCGTATCCGG ACTCATGGGC
CCTTATATGA GCCCCATTCC CATCAATGCC AGTATGGGCA TGCTGATTTC GCTGGCAGTT
GCCTTTATCC TTACGCCCTG GCTCAGCGGC AAGCTGTTAA AAGCCCATCC CCATGAAGGC
ACCAACCAAG AGAATGAATC GCCCCATGGC GGCGAAGACC CGCGCATGGT GCGGATTTTT
ACCCGTCTGA TTGGCCCCTT CCTCAATGGC AAAGCCGGTC GTAAGGCGCG TCTTGGCCTC
GGCCTGGCCA TCATTGGCCT GATTATGGTG GCCGTTGCCC TGCCGGTCAT GCAGGCGGTG
GTGCTCAAGA TGTTGCCCTT TGACAACAAG TCAGAATTCC AGGTGATGGT GGATATGCCG
GAAGGCACCA CCTTTGAAGA AACCCACAAG GTACTGCAAG CTCTGGCAGA CGAACTGGCC
ACGGTCGAAG AAGTGCAGCA TATGCAACTC TATGCTGGCA CAGCTGCCCC CATGAATTTC
AACGGCCTGG TTCGCCATTA CTTTTTGCGC TCAAGCCCCG AGCTTGGCGA TATTCAGGTC
AATCTCAGCG ATAAAAAGCA CAGAAGCAGA GACAGCCACA GTATCGCGCT GGCGGTACGG
GGCCCATTGC AGGAGATTGG CCGTCATTTC GGCGCCAACG TCAAGGTGGT GGAAGTCCCA
CCCGGACCGC CTGTATGGTC GCCTATCGTT GCCGAAGTCT ATGGCCCCAA CGAAGCCATG
CGTCAGGACG CGGCACGTAA CGTCCTTGGG GTATTCAATA CCACTCAGGA CGTGGTGGAT
ATGGATATTT TCCTCCCCAG CGGACAACAT AAATGGCAGG TACTGATTGA CCGCAGTAAG
GCCGCACTGC TTGGGGTTTC CTATGCTGAG ATAGTTGACC TTGTTGCCAC CTCAGTGGGC
GGAAGAGATG TGAGTGTGCT GCACCTGGAG AATCAGGCCC GTCCCGTTCC CATTCGTCTG
CAACTCGAGG AAAGCAGTAA GCTGGATCTG GATGCCATCA TGGGCATGAC ACTGCCGGGT
AGTCGTGGAC TGGTCGCCAT TTCCGAGCTG GTGACTATAC GTAAAGGCGT GATAGATGCG
CCCATCATCC ATAAAAACCT TATCCCCATG GTGATGGTAG TGGCCGATAT GGCAGGGCCG
CTGGACAGCC CGCTGTACGG CATGTTTGAA ATGGCCTCGA CCATTTCAGA CAGTGAAGAG
ATGGGCTACG CCCAGCATTA TGTCAATCAG CCCTCAGGCC TGACCGATGT GGCCGTACTC
TGGGATGGTG AGTGGAAAAT CACCTATGAA ACCTTCCGCG ATATGGGGAT AGCCTATGCG
GTAGGCATGA TTGCCATTTA CCTCTTGGTA GTGGCCCAGT TCAGATCCTA TCTGGTGCCG
CTGATTATTA TGGCGCCTAT TCCGCTGACG GTGATTGGGG TAATGCCCGG GCACGCACTC
TTTGGCGCCC AGTTCACGGC CACCTCCATG ATAGGCATGA TTGCCCTGGC CGGGATTATT
GTCCGCAACT CGATTCTGCT GGTGGACTTT ATCAATCAGG AAGTCGAGCG CGGAGTGCCC
TTTGCCCAGG CCGTGATCCA CTCGGGCGCC GTCAGGGCCA AGCCCATTAT GCTCACGGCG
CTGGCTGCCA TGATTGGCGC CCTCTTCATA CTGGACGATC CCATCTTCAA TGGCTTAGCT
ATCAGCCTGA TTTTCGGGAT ATTTATTTCA ACCTTGCTGA CCTTGGTCGT GATCCCCGTG
CTGTACTACA GTTTTATGAG ACACGGCCAT GAAACCGAAT AA
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| Protein sequence | MTSENLQQLG ISGRIARAFQ ASAITPLLAL LALLLGMFAV MVTPKEEEPQ IDVTFADVFI
PFPGATPAEV EHLVTLPAEQ VISEIKGIDT LYSFSQPDGA LIIAIFEVGV KRNDAIVALY
NQIYSNMDKL PRGAGVGEPL IKPRGIDDVP IVSLTLWSEA QDITPEQLTH VARGLETELK
RIPGTREIYT LGQHELVLNV RIDPAALSAY GLSYSDINRA LSGNNQISMP VPLIQDNQEI
KVQTGQFLRR LEDVQELVVA VRQGADGYSE PVYLADLAEV TLKSDLPRAQ VQHVTKDGSY
PAVTLAIGKQ TGMNAVDIAD AVIERMGALE NTLLPANVHA TVSRNYGDTA ADKSNTLIFK
LIFATTAVVI LVLFTMGMRE ALVVGIAIII TLALTLFASW AWGFTLNRVS LFALIFSIGI
LVDDAIVVVE NIHRHMSMGK RSLRELIPVA VDEVGGPTIL ATFTVIAALL PMAFVSGLMG
PYMSPIPINA SMGMLISLAV AFILTPWLSG KLLKAHPHEG TNQENESPHG GEDPRMVRIF
TRLIGPFLNG KAGRKARLGL GLAIIGLIMV AVALPVMQAV VLKMLPFDNK SEFQVMVDMP
EGTTFEETHK VLQALADELA TVEEVQHMQL YAGTAAPMNF NGLVRHYFLR SSPELGDIQV
NLSDKKHRSR DSHSIALAVR GPLQEIGRHF GANVKVVEVP PGPPVWSPIV AEVYGPNEAM
RQDAARNVLG VFNTTQDVVD MDIFLPSGQH KWQVLIDRSK AALLGVSYAE IVDLVATSVG
GRDVSVLHLE NQARPVPIRL QLEESSKLDL DAIMGMTLPG SRGLVAISEL VTIRKGVIDA
PIIHKNLIPM VMVVADMAGP LDSPLYGMFE MASTISDSEE MGYAQHYVNQ PSGLTDVAVL
WDGEWKITYE TFRDMGIAYA VGMIAIYLLV VAQFRSYLVP LIIMAPIPLT VIGVMPGHAL
FGAQFTATSM IGMIALAGII VRNSILLVDF INQEVERGVP FAQAVIHSGA VRAKPIMLTA
LAAMIGALFI LDDPIFNGLA ISLIFGIFIS TLLTLVVIPV LYYSFMRHGH ETE
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