| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2181 |
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| Symbol | |
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| ID | 4604431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2637764 |
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| End bp | 2638759 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639781566 |
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| Product | AcrA/AcrE family protein |
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| Protein accession | YP_928056 |
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| Protein GI | 119775316 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000164809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0114896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTT TCAAACAGCT CTTGGGACTG TCTCTGTTGG CCCTTGGCCT GAGTGCCCAT
GCTGGCCAAA CCCTGATAGT AGAACACACA GAAGAAGACA GATATTTAAC CCTGGACGCC
CTGATTGAGC CAGTTCAGGC CGCTACAGTC TCGGCGCAAA CGTCGGGCCG GATCCTGAAA
ATCCATTTTG ACGTCAACGA CACTGTGCCT GCCGGTGCTG CCCTGCTGGA AATCACCAGC
AAGGAGCAGG GCGCTGCATT GGCAGCCGCA GAGGCCGACT ACGCCCGCGC CCTGGCGGTG
AACACTGAAG CACAGGCCAC GTTGAGGCGC TATCAGGATC TTTTCCCCAA GGGCGCAATT
TCCCGTGGCA CCTTTGATGA GGCCATTGCC CGCGCCAAGA GCAGCGAACA GGCCGTGACT
GCCGCCAATG CCGCCATAGT GCGCGCCCGC GAATCCTTAA GCTACACCAC TGTGTATGCC
CCATTTGGCG GCGTGCTCAC CGAGCGCCAT GTGGAACAGG GCGAAACCGT TAACCCAGGC
CAGCCACTGC TGTCCGGCTT CAGCGCCGAT AAAATGCGGG CCGTGATGCA AGTGCCCGGT
CGTTATCTCG CCGCCTTGAA GGCCGCCGGT GCCGTGAGTG TGGAACTGGC GGATGGCCGC
AGCATCGACA GCAATCAACT GACTATTTTC AGCTTTGCCT CCCCCCAAAG TCACAGCTTC
CAGGTACGTA TCCAACTGCC AGACAATGCC GATGTGCAAC CGGGCAGCTG GGCCAAGGCC
AGTTTTGTAC AGGGTAAACG CCGCATGCTG CTGGTGCCCC AACGCGCCAT TGTTTCCCGT
GGTGAACTCA CCGGTGTTTA TATGATGCAG GGCGATAAAG CCGTGTTGAC CCAGGTGCGA
CTTGGCAAAC AACAGGGTGA CCGGGTACAG GTGCTCTCAG GCCTCAATGA CGGTGACGTT
ATTGCCGCTG ATGCCTATGC CGTAATTGCC CAGTGA
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| Protein sequence | MTTFKQLLGL SLLALGLSAH AGQTLIVEHT EEDRYLTLDA LIEPVQAATV SAQTSGRILK
IHFDVNDTVP AGAALLEITS KEQGAALAAA EADYARALAV NTEAQATLRR YQDLFPKGAI
SRGTFDEAIA RAKSSEQAVT AANAAIVRAR ESLSYTTVYA PFGGVLTERH VEQGETVNPG
QPLLSGFSAD KMRAVMQVPG RYLAALKAAG AVSVELADGR SIDSNQLTIF SFASPQSHSF
QVRIQLPDNA DVQPGSWAKA SFVQGKRRML LVPQRAIVSR GELTGVYMMQ GDKAVLTQVR
LGKQQGDRVQ VLSGLNDGDV IAADAYAVIA Q
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