| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2172 |
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| Symbol | |
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| ID | 4604422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2626837 |
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| End bp | 2627820 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781557 |
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| Product | von Willebrand factor type A domain-containing protein |
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| Protein accession | YP_928047 |
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| Protein GI | 119775307 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0626942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACCC TGGCATTCCC CTGGCTCCTT TTGCTGCTGC CATTACCGCT TTTGATAAAG
CCGGTTCAGC GCCAAACTCG GGGTGGATTT CTTCATTTGC CCGGTAGCGC CGATCTGGTC
GCCGATGTCA GTAAAAGCAC ACCCAAAGCA AGGGATATGC TCAAGTGGCT GATGTGGACA
GCGCTGGTGC TTGCGGTCGC CCGCCCGCAG TGGCTTGGCG ACCCCATAGA GCTGCCGAGT
AAAGGGCGAG ACTTGATGGT TGCGGTGGAC CTTTCAGGCT CAATGCAAAT CGAAGACATG
GTGCTGGACA ACAAAACTGT GGACAGGTTT ACCCTGGTTC AGCATGTAGT GAGCGACTTT
ATTGAACGCA GGGTCGGCGA CCGTATCGGG CTTATCCTGT TTGGCGATCA CGCTTACCTG
CAATCGCCCA TGACACAGGA CAGGCGCTCC GTCGCCCAGT ATCTGCGTGA AGCCCAAATC
GGCTTGGTTG GCAAGCAAAC TGCTATCGGC GAGTCCATTG CGCTGGCGGT GAAGCGATTT
GAAAACCTTG AAGAAAGTAA CAGAGTGCTG GTACTGCTCA CCGACGGCAC CAACAACGCA
GGCAGTATTT CACCAGACAA AGCCGCTGCC ATTGCCGCCG AACGCAAGGT CACCATTTAT
ACCATAGGCG TCGGGGCAGA GATGATGGAG CGGCGCAGCT TTTTCGGCCG CGACAGAGTC
AACCCATCGA TGGATCTGGA TGAAGAGCAG CTTCAGCGCA TTGCCAATGC CACCCAAGGC
AAGTATTTCA GAGCCCGCAG CAGTGAGGAT CTTGCCGCTA TCTATCAGGA AATCGACAAA
CTCGAGCCCG TGAGCCGCGA TACCCAGAGT TTCAGACCCA AGCAGGAGCT GTTTTTCTAT
CCCCTTGCCC TCGCCTTATT CTTGAGCCTA TTGGCGGCGC TGCGGGAAGG CGGTCTGTTT
GCTTCCGGGA GGAATGCGCC ATGA
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| Protein sequence | MLTLAFPWLL LLLPLPLLIK PVQRQTRGGF LHLPGSADLV ADVSKSTPKA RDMLKWLMWT
ALVLAVARPQ WLGDPIELPS KGRDLMVAVD LSGSMQIEDM VLDNKTVDRF TLVQHVVSDF
IERRVGDRIG LILFGDHAYL QSPMTQDRRS VAQYLREAQI GLVGKQTAIG ESIALAVKRF
ENLEESNRVL VLLTDGTNNA GSISPDKAAA IAAERKVTIY TIGVGAEMME RRSFFGRDRV
NPSMDLDEEQ LQRIANATQG KYFRARSSED LAAIYQEIDK LEPVSRDTQS FRPKQELFFY
PLALALFLSL LAALREGGLF ASGRNAP
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