| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2167 |
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| Symbol | fadJ |
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| ID | 4604417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2620722 |
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| End bp | 2622842 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781552 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_928042 |
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| Protein GI | 119775302 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.359385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.453663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA CTTTTAGCCT AAGCCGCCGT GACGACGGCA TCGCGCTGCT GACCATGGAT
GTGCCCGGTG AAACCATGAA CACCCTGAAG GCGCAGTTTG CTCCGGAGAT CACCGCGATA
TTGCAGGAAA TCAAAGCGGA TAGCAGCATC AAGGGCCTGG TTCTGATTTC CGGCAAAGCC
GACTCCTTTG TGGCCGGTGC CGATATTTCC ATGTTGGATG CCTGTGAAAC CGCAGAAGAC
GCAAGATTGC TGTCCCGTCA GGGTCACCAC GTGTTTGCCG AGTTGGAAGG GCTGAATATT
CCGGTGGTGG CCGCCATTCA TGGTGCCTGC CTTGGTGGTG GTTTGGAGTT GGCACTGGCA
TGCCATCAGC GGGTGTGCAG CGACAGCAGC AAAACCATGC TTGGCGTGCC GGAAGTGCAG
TTAGGCCTGC TGCCCGGCGG CGGTGGAACC CAGCGTTTGC CGCGCTTGAT TGGTATTGCC
AAGGCGCTCG ATTTGATGCT TACCGGTAAG CAGGTGCGCC CCAAGCAGGC CGTCAAAATG
GGGCTGGTGG ATGATGTAGT GCCCGAGTCC ATTCTGCTCG ATACCGCCAT TGAGATGGCG
TTAGCCGGTA AAAAGACCCG CAAGCCATTG AAGCAACCGC TGGTGACCAA ACTTTTGGAA
GGCACGCCTG TTGGTCGCAA CATCATGTTC GATCAGGCCA CCAAGCAAGT TCTGAAAAAG
ACGCAGGGCA ACTATCCATC ACCACTGAAA ATTATTGATT GCGTGCGGGA AGGTATGGCC
AAGGGCATGG AGAAAGGCCT GGAAGTCGAA GCGGCGCACT TTGGCGCCTT GGTGGCTACC
CCTGAGTCCG CGGCGCTGCG CTCTATTTTC TTTGCGACCA CCGAAATGAA AAAAGAAACC
GGTGCCGGAG ATGCCAAGCC CCGCAAGGTG GCCAAAGCCG TGGTGCTGGG TGGCGGTCTG
ATGGGCGGCG GTATTGCCTC TGTTACAACC ACCAAGGCTA AAGTGCCTGT GCGGGTGAAG
GATATCAGCG ATAAGGGCCT GTCCAATGCC CTTGGCTACG CGTATAAACT GCTGGATAAG
GGCGTGAAGC GCCGCCATAT GACGAGCGCA GAGCGTGACA AGTTGATGGC ATTGATGACC
ACCACCACTG AATATCGTGG TGTGAAGGAT GCCGATATCG TGGTCGAAGC GGTATTTGAA
GACCTGAATC TCAAACATCA GATGGTGCGC GATATTGAGA GAGAATGTGG CGAGCACACC
ATTTTTGCCT CCAACACCTC GTCTTTGCCT ATTACCCAAA TCGCGGCGGC GGCCAGCCGT
CCTGAAAATG TGATTGGTCT GCATTACTTC TCGCCGGTGG AAAAAATGCC GCTGGTAGAA
GTGATTGCCC ATGAGAAGAC ATCGCCAGAG ACCATTGCAA CCACAGTAGC CTTTGCCCGT
AAGCAGGGGA AAACCCCGAT TGTGGTTAAG GACTGTGCCG GTTTTTATGT GAACCGTATT
TTGGCGCTCT ACATGAATGA GGCCGCTCAG CTCTTATTGG AAGGGCAGGC AGTTGATCAT
TTGGACAAGG CACTGGTGAA GTTTGGTTTC CCTGTTGGTC CCATGACCTT GCTGGATGAA
GTGGGCATTG ATGTGGGCGC CAAGATTTCG CCCATTCTTG AAAAAGAGTT AGGTGAGCGG
TTCAAGGCTC CGGCTGCGTT TGACAAACTC ATGGCCGACG ATCGCAAAGG TCGTAAAAAC
GGTAAGGGTT TCTACCTGTA CGGTAAAGCC GCCAAAAAAG GTAAAAAAGT CGACGAAAGT
GTTTACAGCT TGCTTGGCTT AACACCGGCA ACCGGTAAAG AAGCCGGTGA AATCGCCGAG
CGTTGTGTGG TGCAGATGCT TAATGAAGCG GTTCGCTGCC TGGAGGAAGG CATAATTGCA
TCTCCACGTG ATGGTGATAT TGGCGCTATC TTTGGCATTG GTTTCCCGCC GTTCCTGGGG
GGGCCTTTCC GTTATATGGA TACTTTGGGC GCCGCTAAGA TGGTAAGACT GCTGGAAGGT
TATCAGAGCA AGTATGGTGA CAGGTTTGCA CCAGCAGCAC TGCTTAAAGC CATGGCCGCA
GAGGGCAAAA CCTTTTATTA A
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| Protein sequence | MEKTFSLSRR DDGIALLTMD VPGETMNTLK AQFAPEITAI LQEIKADSSI KGLVLISGKA
DSFVAGADIS MLDACETAED ARLLSRQGHH VFAELEGLNI PVVAAIHGAC LGGGLELALA
CHQRVCSDSS KTMLGVPEVQ LGLLPGGGGT QRLPRLIGIA KALDLMLTGK QVRPKQAVKM
GLVDDVVPES ILLDTAIEMA LAGKKTRKPL KQPLVTKLLE GTPVGRNIMF DQATKQVLKK
TQGNYPSPLK IIDCVREGMA KGMEKGLEVE AAHFGALVAT PESAALRSIF FATTEMKKET
GAGDAKPRKV AKAVVLGGGL MGGGIASVTT TKAKVPVRVK DISDKGLSNA LGYAYKLLDK
GVKRRHMTSA ERDKLMALMT TTTEYRGVKD ADIVVEAVFE DLNLKHQMVR DIERECGEHT
IFASNTSSLP ITQIAAAASR PENVIGLHYF SPVEKMPLVE VIAHEKTSPE TIATTVAFAR
KQGKTPIVVK DCAGFYVNRI LALYMNEAAQ LLLEGQAVDH LDKALVKFGF PVGPMTLLDE
VGIDVGAKIS PILEKELGER FKAPAAFDKL MADDRKGRKN GKGFYLYGKA AKKGKKVDES
VYSLLGLTPA TGKEAGEIAE RCVVQMLNEA VRCLEEGIIA SPRDGDIGAI FGIGFPPFLG
GPFRYMDTLG AAKMVRLLEG YQSKYGDRFA PAALLKAMAA EGKTFY
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