| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2160 |
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| Symbol | |
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| ID | 4604410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2609875 |
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| End bp | 2610819 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781545 |
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| Product | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase |
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| Protein accession | YP_928035 |
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| Protein GI | 119775295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.971286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAAGA TATTTGTTGA TGAAGCTGTT ACCGAGCTTC GCACCATCGG CGATATGCTG
CGCTGGGCCG TGAGCCGCTT TAACGATGCC AAGGTATATT ACGGTCATGG TACCGACAAC
GCCTGGGACG AGGCTGTCGC TCTGGTATTT CATGCCTTGC ACTTGCCTGA CGATTTGGGC
CGTGAAGTCA TTGGCGCCAA CCTTACCAGC AGCGAAAAAC ACAAAATTGT TGAGCTGATT
ATCCGTCGGG TGCGTGAACG CCTGCCAGTG CCCTATTTGA CCAACCGCGC CTGGTTCGCC
GGTCTCGAGT TTTATGTGGA CGAGCGGGTA TTGGTACCAC GCTCTCCCAT CGCAGAAATG
ATAGAAGATC GCTTCGGTCC CTGGCTATAC AACAAGCCTG TAAACCGTGT GCTGGATTTG
TGCACCGGCA GTGGTTGCAT TGCTATTGCC TGCGCCCACA CCTTTGAAGA CGCCGAAGTG
GACGCGCTGG ACATCAGTGA AGATGCACTG GATGTCGCCC AGATTAACGT GGAATCCCAT
GGTCTGGTAG AGCGGGTGTT CCCAATGCAG TCTGATTTGT TTTCAGCTAT CCCAAAAGGC
CCGCAGTACG ATCTGATTGT CTCCAACCCG CCTTATGTGG ATGAAGAAGA TATCGGCGAT
ATGCCGGACG AGTACCACCA TGAACCCGCC ATTGGTTTGG CCTCAGGTCG TGATGGCCTG
GACATCACCA AGCGCATTCT GGCCAATGCC GCCGACTACC TGACGCCATC GGGCATTCTG
GTGGTGGAAG TGGGCAACTC CATGGTGCAC CTGATGGAGC AATTCCCCGA AGTGCCTTTC
ACCTGGGTGA GCTTCGAGCG TGGCGGAGAT GGGGTGTTTG TGCTCACTTA CGACCAGCTA
GTTGAAAATG AATCACTGTT CGCCATCTAT AAAGATAGGG AATAA
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| Protein sequence | MDKIFVDEAV TELRTIGDML RWAVSRFNDA KVYYGHGTDN AWDEAVALVF HALHLPDDLG
REVIGANLTS SEKHKIVELI IRRVRERLPV PYLTNRAWFA GLEFYVDERV LVPRSPIAEM
IEDRFGPWLY NKPVNRVLDL CTGSGCIAIA CAHTFEDAEV DALDISEDAL DVAQINVESH
GLVERVFPMQ SDLFSAIPKG PQYDLIVSNP PYVDEEDIGD MPDEYHHEPA IGLASGRDGL
DITKRILANA ADYLTPSGIL VVEVGNSMVH LMEQFPEVPF TWVSFERGGD GVFVLTYDQL
VENESLFAIY KDRE
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