| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2159 |
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| Symbol | |
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| ID | 4604409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2608704 |
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| End bp | 2609801 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781544 |
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| Product | chorismate synthase |
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| Protein accession | YP_928034 |
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| Protein GI | 119775294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGGA ACAGCATAGG TCAGAATTTC GTGGTTACTA CCTTTGGCGA GAGCCATGGG
GTGGCGCTCG GTTGCATTAT CGATGGTTGC CCTCCGGGCC TCGAGCTTAC CGAAGCTGAT
ATGCAGCACG ATCTTGACCG TCGCCGTCCG GGCACGTCCC GCTACACCAC GGCGCGCCGC
GAGCCGGACG AAGTGCGTAT TCTCTCAGGT GTTTTCGAAG GCAAAACAAC AGGAACCTCC
ATTGGTCTGA TTATCGAAAA CACCGATCAG CGCAGCCAGG ACTACAGCAA TATCAAAGAC
CTGTTCCGCC CCGGTCACGC CGATTACACC TATCAACAAA AGTACGGTCT GCGGGATTAT
CGCGGCGGTG GCCGTTCGTC CGCCCGAGAA ACCGCCATGC GGGTTGCCGC CGGCGCTGTG
GCGAAAAAGT ACCTCAAGGC CGTTCACGGG ATCGAAATTT ACGGCTTCCT GTCGCAACTT
GGCCCCATTG AGGCAGAGCA CATCGACCGC GAGCAGATTG AGCAAAACGC CTTTTTCTTC
CCTGATGCCA GCAAGCTTGA AGCGCTGGAT GAATATATGC GCGAGCTGAA AAAATCCGGC
GACTCCATCG GTGCCAAGGT CAGCGTGATT GCCACCAATG TACCAGTGGG CCTGGGCGAG
CCTGTGTTTG ACCGTCTTGA TGCCGACATC GCCCATGCGC TGATGGGCAT CAATGCCGTG
AAGGGAGTGG AAATTGGCGA TGGTTTCGCG GTAGTGACCC AAAAGGGCTC CGAGCATCGT
GATTTGATGT CACCCGAGGG CTTTGCCAGC AACCATGCCG GCGGCGTGCT TGGCGGCATT
TCATCCGGTC AGCCAATTGT GGCCCATATG GCGCTTAAGC CAACCTCCAG TATCAGCATT
CCCGGCGAGA GCATGACAGT GCAGGGCAAT ACTGCGGAAG TGGTTACCAA GGGCCGTCAC
GACCCCTGCG TGGGCATTCG CGCCGTGCCT ATTGCCGAGG CCATGTTGGC GATTGTATTG
ATGGATCATC TGCTCAGACA CCGTGCTCAG AATCAGCACG TGCACAGCGA AACCCCTGTG
CTGGGGATGC GCTCTTAA
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| Protein sequence | MSGNSIGQNF VVTTFGESHG VALGCIIDGC PPGLELTEAD MQHDLDRRRP GTSRYTTARR
EPDEVRILSG VFEGKTTGTS IGLIIENTDQ RSQDYSNIKD LFRPGHADYT YQQKYGLRDY
RGGGRSSARE TAMRVAAGAV AKKYLKAVHG IEIYGFLSQL GPIEAEHIDR EQIEQNAFFF
PDASKLEALD EYMRELKKSG DSIGAKVSVI ATNVPVGLGE PVFDRLDADI AHALMGINAV
KGVEIGDGFA VVTQKGSEHR DLMSPEGFAS NHAGGVLGGI SSGQPIVAHM ALKPTSSISI
PGESMTVQGN TAEVVTKGRH DPCVGIRAVP IAEAMLAIVL MDHLLRHRAQ NQHVHSETPV
LGMRS
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