| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2153 |
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| Symbol | |
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| ID | 4604403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2601632 |
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| End bp | 2602759 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781538 |
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| Product | erythronate-4-phosphate dehydrogenase |
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| Protein accession | YP_928028 |
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| Protein GI | 119775288 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00505517 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA TCGCGGACGA GAATATGCCC TATGTGGATG TACTCTTCGG AGAGCTTGGG
GAGATTGAAT ACGTCAATGG CCGCACTCTG GCACCTGAGC AGTTAGCCGA TGCCGATGTG
CTGCTGGTAC GCTCGGTAAC TCAGGTCAAT GAAGCACTAT TGTGCCAAAA CCAACAGCTT
AAGTTTGTTG GCAGCGCCAC CATAGGGACA GACCATGTGG ACACAGCCTA TCTGAAAAGC
CGGGGTATCC CCTTTACCAA TGCGCCCGGG TGCAATGCCA CTGCAGTAGG TGAATATGCG
TTTATTGCCA TGCTGGAGCT TGCTCAGCGT TATCGGCAGC CGCTGAAAGA TAAAAAAGTC
GCGGTAATAG GTGCCGGGAA CACTGGCACT GCCACAGCCC GTTGTCTCGA AGCATATGGG
GTCGAACACC GGCTGTGCGA CCCCGTGTTG GCAGCACAGG GCGACAATCG CCAATTTTAC
GAGCTCGATG AGCTTATTGC CTGGGCCGAT GTGATAAGCC TGCATGTGCC AATTACCAAA
GGTGGCGATC ATCCCACCTG GTATTTGTTC GACCAACAAC GACTTGAAGC CCTGAAAACC
GGTGCCTGGC TGCTCAACTG CTGCCGTGGT GAGGTGATAG ACAATCGAGC CCTTATCGAA
GTTAAGCAAA GACGGGTCGA CATCAAACTG GTGTTGGATG TGTGGGAAGG CGAGCCCAGT
CCCATGTTGG CGCTGGTGCC GCTGGTGGAT ATCGCCACGC CACACATTGC CGGTTATAGC
CTGGAAGGTA AGGCCAGAGG CACTTTTATG CTGTATGAAG CGCTTTGCCG GGTAATGGGT
AAGACTGGTG AAAATAGCTT CCACAGCCTG CTGCCCCCCT TCTTTTTGGG CTCAATGCAA
GTTCGGGAGT TGGGGGACGA GAGGGCACTG CTGACACTGT GCCGGACGGT ATACGATCTG
CGGGATGACG ATATCCACTT CAGGCAATCG GGCACCGACA GACTCGGATT TGACAAAATG
AGAAAAAATC ACCGTCACAG ACGCGAATTC AGCGCCCTTA AGCTGGAAAA TGCTAAGGGA
TCTGAGGTAA ATTGGTTGTC CTTTTTGGGT TTTTCTAACG TCGGTTGA
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| Protein sequence | MKIIADENMP YVDVLFGELG EIEYVNGRTL APEQLADADV LLVRSVTQVN EALLCQNQQL
KFVGSATIGT DHVDTAYLKS RGIPFTNAPG CNATAVGEYA FIAMLELAQR YRQPLKDKKV
AVIGAGNTGT ATARCLEAYG VEHRLCDPVL AAQGDNRQFY ELDELIAWAD VISLHVPITK
GGDHPTWYLF DQQRLEALKT GAWLLNCCRG EVIDNRALIE VKQRRVDIKL VLDVWEGEPS
PMLALVPLVD IATPHIAGYS LEGKARGTFM LYEALCRVMG KTGENSFHSL LPPFFLGSMQ
VRELGDERAL LTLCRTVYDL RDDDIHFRQS GTDRLGFDKM RKNHRHRREF SALKLENAKG
SEVNWLSFLG FSNVG
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