Gene Sama_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2129 
Symbol 
ID4604379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2574098 
End bp2575681 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content55% 
IMG OID639781514 
Productanthranilate synthase component I 
Protein accessionYP_928004 
Protein GI119775264 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0147] Anthranilate/para-aminobenzoate synthases component I 
TIGRFAM ID[TIGR00565] anthranilate synthase component I, proteobacterial subset 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.777087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC AGGCGTTTGA TGCCAAGGCA GAGGGAAAGC TGGCCACAGG CAAATTGACC 
AAGCAGCCCT TGCCTTACCA GGATGACCCG CTGGCCCTCT ACGAGAGCCT GACTCAGGAT
GCCCACCACA CACTTTTGCT GGAATCGGCT GAAATCGACA GCAAAGAGAA CCTGAAAAGC
ATCATCATGA CCCACGCGGC CCTGAAAATT GCAGCCCAGG GCTATCGGTT GGAGTTTACC
GCGCTGGACG ACAATGGCCG GGTGCTGCTG CCTGCCATCG CCGGTTTTTT TAACTGCGAA
CTGACTGAAA CCAATTACCT TGCCGTGACC TTAACACGCG ACACCGGTCT ACTGGATGAA
GATGCCAGGC TAAAATCCAC CTCGCCTCTG GATGGCCTGC GGGCACTACT CAAACATATC
CATGTGGGTG AAAAGGTTGC CTTTGAGGAT CTTTTCCTCG GTGGCGTACT GGCATACGAT
TTGATTGATA CCGTTGAGCC ACTTCCCAAA GCAAGGGACG GCGCCAATAC CTGCCCGGAT
TATCTCTTTT ATCTCGCCGA CACCCTGGTG CTTGTGGACC ACAAGGCCAA ACAGGCCGAG
TTGGTCTTGT CGACCTTTTC CGCGGACGGG CAAATATCCC CCTTCATAGA AGATGAACTC
AAGCGCCGCG CCAAGGTGAT CGAGGCCATC GCCAATCGTC CCCGCCCGGT TAAAGCCCTC
AAACCGGTGA ATGTCGAGGC CAGCGTCAGC ATCAGTGACG AAGACTTTAA AGACGCGGTG
AACGCCCTGA AAGAGCACAT CATCGCCGGC GATATTTTTC AGGTGGTGCC TTCAAGAAGC
TTCAGTCTGC CTTGCCCCAA TACCCTTGGC GCTTATAGAG CACTGCGTAA AACCAATCCC
AGCCCCTACA TGTTTTATTT TCGCAGCAGC GATTTCACCC TCTTTGGCGC CTCACCTGAA
AGCGCGCTCA AATACGATGC TGACAGTAAT CAGGTGGAAG TCTACCCCAT CGCCGGTACC
CGTAAGCGCG GCAAAGATGC CAGTGGCAAC ATAGATCACG ACCTGGATGG CCGTATCGAG
CTGGAGCTGC GCCTCGATAA AAAGGAACTC TCTGAGCACC TGATGCTGGT CGATTTGGCC
CGAAATGATA TAGCCCGTAT CAGCCAAAGC GGCACCCGCA AGGTAGCAGA GCTGTTGAAA
GTTGACCGCT ACAGCCACGT GATGCATCTG GTCAGCCGGG TCACAGGTCA ACTGAGGCAG
GATCTCGACG CCCTCCATGC TTATCAGGCC TGCATGAATA TGGGCACGCT CACAGGCGCA
CCCAAGGTCA GGGCTTCCCA GCTTATCCGC GAAACGGAAA AGACACGCAG GGGCAGCTAT
GGCGGCGCCG TGGGTTACCT TTCCGCCACC GGTGACATGG ATACCTGTAT CGTTATTCGT
TCGGCCTTTG TGAAAGACGG CCTTGCCCAT ATCCAGGCCG GTGCCGGTGT GGTGTATGAC
TCAGATCCCC AGGCAGAGGC AGACGAAACC CGTCAAAAAG CACAGGCAGT GATCTCTGCC
ATCAAACTGG GAGGTGGCCT GTGA
 
Protein sequence
MTQQAFDAKA EGKLATGKLT KQPLPYQDDP LALYESLTQD AHHTLLLESA EIDSKENLKS 
IIMTHAALKI AAQGYRLEFT ALDDNGRVLL PAIAGFFNCE LTETNYLAVT LTRDTGLLDE
DARLKSTSPL DGLRALLKHI HVGEKVAFED LFLGGVLAYD LIDTVEPLPK ARDGANTCPD
YLFYLADTLV LVDHKAKQAE LVLSTFSADG QISPFIEDEL KRRAKVIEAI ANRPRPVKAL
KPVNVEASVS ISDEDFKDAV NALKEHIIAG DIFQVVPSRS FSLPCPNTLG AYRALRKTNP
SPYMFYFRSS DFTLFGASPE SALKYDADSN QVEVYPIAGT RKRGKDASGN IDHDLDGRIE
LELRLDKKEL SEHLMLVDLA RNDIARISQS GTRKVAELLK VDRYSHVMHL VSRVTGQLRQ
DLDALHAYQA CMNMGTLTGA PKVRASQLIR ETEKTRRGSY GGAVGYLSAT GDMDTCIVIR
SAFVKDGLAH IQAGAGVVYD SDPQAEADET RQKAQAVISA IKLGGGL