| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2128 |
|---|
| Symbol | |
|---|
| ID | 4604378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 2572884 |
|---|
| End bp | 2573744 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639781513 |
|---|
| Product | PHP-like protein |
|---|
| Protein accession | YP_928003 |
|---|
| Protein GI | 119775263 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATG AAAATTATTT GGTTGATCTC CACTGCCATA CCACAGCGTC CGACGGACAA
CTTTCGCCCT CGGATGTGGT CACCCGCGCC ATTGAACGCG GCGTGAATTT GCTTGCGATT
ACCGATCACG ACACCCTCGA CGGGCTTGAA GAGGCCCACG GCACCAACAA TGCGTCGCAG
TCGCCGCTCG AACTGGTTGA CGGGGTAGAA ATTTCAACCC GATGGCACAG TTACGATATC
CACATTGTGG CGCTGCAGGT GGACCGGCAT CACCCTGAGT TACAGGCGTT TCTTGCGCGG
CAACGGGAGC TAAGGGAAAT CCGTGCCCGT GAAATAGGCA ATCGTCTGAC CAAGGCCGGT
ATCGAAGGTA CCTTTGAAGC GGCAAAGGAA CTGGCCGGAA ACGCGGCTGT GAGCCGCGGC
CACTACGCCA GGGTACTGGT TGAGCGGGGC ATTGCCGCAG ACATGGCCGG GGTATTCAAG
CGCTTTCTGG CCCGCAACAA AACCGGCTAT GTGCCCAATA ACTGGGGCGA TATGGCCTCG
GCGATTGCGA TTATTCATCG TGCCGGCGGT GTGGCAGTGC TTGCCCACCC CAGTGGCTAT
AAAATGTCGG CCAAGTGGCT GAAAAAATTG GTGCGGGAAT TTAAAGAAGC TGGCGGCGAT
GCCATGGAAG TGGTGCTGGG GCAGCAAACA TTAGAGGACA GAGCCAATTT GGTGGCGCTG
TCCCATCTCA ACGGCTTATA CGGCAGCTTG GGCAGCGATT TTCATTTTCC CGGCAGCTTT
GTCGAGCTGG GTAAAAATCT TTACCGACCA CAGGGCGTGA CCTGGGTCTG GCAAACCGAA
CTCTGGGGGA CGAGGGAATG A
|
|---|
| Protein sequence | MNDENYLVDL HCHTTASDGQ LSPSDVVTRA IERGVNLLAI TDHDTLDGLE EAHGTNNASQ
SPLELVDGVE ISTRWHSYDI HIVALQVDRH HPELQAFLAR QRELREIRAR EIGNRLTKAG
IEGTFEAAKE LAGNAAVSRG HYARVLVERG IAADMAGVFK RFLARNKTGY VPNNWGDMAS
AIAIIHRAGG VAVLAHPSGY KMSAKWLKKL VREFKEAGGD AMEVVLGQQT LEDRANLVAL
SHLNGLYGSL GSDFHFPGSF VELGKNLYRP QGVTWVWQTE LWGTRE
|
|---|
| |