| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2127 |
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| Symbol | |
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| ID | 4604377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2572267 |
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| End bp | 2572887 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781512 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_928002 |
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| Protein GI | 119775262 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT TTTTTTATGT GCATGAGGTG AATCCTCAAA AACGCTTGAT AGATCAGGCG
GTCAATATTC TTAGAAGTGG CGGCGTGATT GTGTATCCCA CCGACTCGGG GTATGCCCTG
GGCTGCCTGA TTGGCGATAA AAACGCCATG GAGCGTATCG TGCGAATTCG TCAGATGGAG
CAGGATCATC ACTTCTCTTT GATGTGCCGT GACCTGTCTG AAATTGCGAC CTACGCCAGG
GTCGAGAATC AGGCCTTCCG CTTGGTGAAA CACTGCACGC CCGGGCCTTA CACCTTTATT
TTCAAGGCCA CCAAAGAAGT ACCGCGCCGT TTGCAAAACG ACAAGAAGAA AACCATTGGT
ATCCGCGTGC CCGACAACGT GATAGCCCTG GCACTGCTCG AAGCACTCGG TGAGCCTTTA
ATGTCCACCA GTTTGGTGAT GCCCGGCCAG GAGTTCGCCG AATCGGATCC TGAACATATC
CGCGACCTGC TCGAACACCA GGTTGAGGCT ATTCTCAATG GTGGTTACCT CGGTGAGAGT
CCGACCACTG TGGTGGATAT GTCGGAAGAC ACCTTCGAGG TGCTCCGGGA AGGCGCCGGG
GATATCAGTC CGTTTCTGTA A
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| Protein sequence | MSQFFYVHEV NPQKRLIDQA VNILRSGGVI VYPTDSGYAL GCLIGDKNAM ERIVRIRQME
QDHHFSLMCR DLSEIATYAR VENQAFRLVK HCTPGPYTFI FKATKEVPRR LQNDKKKTIG
IRVPDNVIAL ALLEALGEPL MSTSLVMPGQ EFAESDPEHI RDLLEHQVEA ILNGGYLGES
PTTVVDMSED TFEVLREGAG DISPFL
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