| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2120 |
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| Symbol | |
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| ID | 4604370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2564228 |
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| End bp | 2566708 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781505 |
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| Product | hypothetical protein |
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| Protein accession | YP_927995 |
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| Protein GI | 119775255 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000487086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.788805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TCATTTTGGG AGTAGCAATC GCCTCGGCTC TGGGCCTCAG CGGCTGTGGT
GGTGAGGATA GTGTCAATGA GCTCAGGGAT AATATCGAGC CGCTGATCCC CGAGTCCCAC
CTGGTGTTTG ATCCAACCGC TGGCAAGGTA CCGCTGCCGA GCGATCTGCT GTTCAGTGGC
ACCCTCGATG GTACCCTGGC CATTCCCGGC GAAGAAGGCG GTGATTATAC CAACCCTCAG
TACGCCATCG GCGCGCTTGA TGGCTGGTCC ACCACGCAGC CCATCAGCAT TGATTTTGCC
CCATCCAGAG ATCACAGCGG TAACCTGCTG TCACTAAACG CAGCCTCTGT ATTCCAGCCC
GGCGCCGTGC GTGTTTTTGA AGCCACTGTG GGCGGCGCGC TCTCCTCGGA TGCAGAATGT
AAAGCGGCGC CTTCGGTATC AGCCTGTAAG ATTGGCGATG AGCTGCAATT CGGTGTCGAC
TTTATCAGTC AGGCAGTGGG CAACAAGATT GTCATCGTGC CCTTAAAGCC ACTGAAAGCC
GGTCAGTCGT ACATTTACGC CACCACGACT CTGATTGAAG ACTCTGAAAA CCGTCCGGTC
GCCACTTCGT CGACCTACGG CTCGGTAAAG ATGGATATCA CCACCCATCC GCTGGGCACC
GAAGCACAGC GCGGCTTGCA GGCGTTGGTT AACAGCTATG AAAATGCCCT CGAGTCCAAA
GGTGTCGATA AGGCCAGCAT CACCTACTCG AGCCTCTTTA CCACCCAATC GGTTAATCCT
GCTTATGAAA CCCTGAAACT GCTGATGGCG AGCAACGATG CGTTCAAGCC ATCGTTCGAT
ATGTTTCCAA CCCCAACCGG GATGACAGTG GCGCAAATGG CCGGTATGAG CCCGGAAATG
GGTCTGCCCT ACGTACTGTC TGATTTGGCC GATGTATATG TTGCCAAAAT CAAGCTGCCG
GTTTATAGCG ATTGTTCCGC CAACGGCTGT TTGACCGCTG ACATGGCGCC CAAGATTAAC
GGCCGCTGGA CTGCGCTGGG TGACAGCCCA GTGTCTGTGC TGCTTGCGCT GCAGGCAGGC
ACCCTGAGCC AACAAAACTT TGGTGCCCAG GCGATGGCGC AGGGTATTGA AGACCCTGCT
GCCGCGCTGG CAAACCCGGC GCTGCTGGCT GGAAAGCAGT TTAAGCTTGA TGATGGTACC
CCAGCGGATA AAACCCGCCA CGTCACCAAA TTCAACCCTA TTCCAGCGCC CAAGACATAC
GAAAGTGTCT CTGTGCTGAT GACTCTGCCC AACGCCGCCA AGCTGAAGGC CTTTACCGAA
GCTCAGGGGC AGGCCTTTGT GCCACCTGCC AATGGCTGGC CGGTAAATAT TGCCATGCAT
GGTCTGGGCG GTGGTAAAGA AATGGCGCTC GCCTATGCGG GTACCTATGC CGCAGCCGGT
GTGGCCACTG TCGCCATCGA TATGCCGCTT CATGGTGAGC GTTCATTTGA TGCCAACAAA
GATGGTATCT ATGAAGTTTC AGCGACCGAT CCGTCATTTG GTCCTGTGGT TGGTAAACCT
GACGCGTTCA AAAATGGTTC ACCGCTGGTG TTTGTAAATA TCGCAAGTTC ACTGTCGGTG
CGGGATAACT TCCGTCAGGC CGTGGCCGAC CATCTGGGCG TGCGTTTGGC ACTTACAGGC
ATGGCGCAAT ATTTGGCCGC CAACAACCAG CCTCAGGTAT TCGATGTGTC CAAGGTGTCT
TCCCAGGGCC TGAGCCTCGG TGGCATTGTA AACACCAACT TTGCGACCTA CGCTTCAACC
GGTTTGGTTG ACCCAGGCAC AGGTACTCAG TTGCCCAATC CCTATGCCAT CACTGCGGCT
TCACTGGTTG CGCCTTCCGG TGGCTTGGCT GGCGCCTTCG CGGGCTCCGC GACCTTTGGC
CCTGTGCTCT TTAATACCAT TACCGGTACT TCTGAGTTCC AGGCCATGGT GGATGCGGCC
AACACGGCAG GTTATGAGCC CGGTAGCCCT GAATACGCGG CGCTGGTACA GCAGGTTTAT
GCCGGCTTTA TCCCTACTTT CGCGTTTGCC ATCCAGACCG GTGTGGACTC CATTGACCCG
GTTAACCATG CTGGCATGCT GAAGGCAACG GGTTTGCCTG TTCATCTGAT TGAGGTGGTG
GGTGACGGTA ACGGTAACCT GCCTGATCAG GTACTGCCAA ACAGTGTGGA AGGCTTCCCG
CTGTCGGGAA CCGAGCCACT GATTGCAAAC CTGGGGCTGG AGTGTCGTGA CACCACGGCT
CAGGGCGGCG GTGCAGTGCG CTTTATCAAG GGGCATCACA GCTCTATCGT GGATCCAAGC
GAGAACGGTG CCACCGATGG CAAGGCGGCT GCGTCGACTG CAGAGATGCA GTGGCAGGTA
GCAGGTTTTG CCAAGTCGGC AGCTGCAGGC ACAGCCACCA TTCTGGTGAA CGATGCCAGT
GTGCTTAAAG CCTGCGACTG A
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| Protein sequence | MKRLILGVAI ASALGLSGCG GEDSVNELRD NIEPLIPESH LVFDPTAGKV PLPSDLLFSG
TLDGTLAIPG EEGGDYTNPQ YAIGALDGWS TTQPISIDFA PSRDHSGNLL SLNAASVFQP
GAVRVFEATV GGALSSDAEC KAAPSVSACK IGDELQFGVD FISQAVGNKI VIVPLKPLKA
GQSYIYATTT LIEDSENRPV ATSSTYGSVK MDITTHPLGT EAQRGLQALV NSYENALESK
GVDKASITYS SLFTTQSVNP AYETLKLLMA SNDAFKPSFD MFPTPTGMTV AQMAGMSPEM
GLPYVLSDLA DVYVAKIKLP VYSDCSANGC LTADMAPKIN GRWTALGDSP VSVLLALQAG
TLSQQNFGAQ AMAQGIEDPA AALANPALLA GKQFKLDDGT PADKTRHVTK FNPIPAPKTY
ESVSVLMTLP NAAKLKAFTE AQGQAFVPPA NGWPVNIAMH GLGGGKEMAL AYAGTYAAAG
VATVAIDMPL HGERSFDANK DGIYEVSATD PSFGPVVGKP DAFKNGSPLV FVNIASSLSV
RDNFRQAVAD HLGVRLALTG MAQYLAANNQ PQVFDVSKVS SQGLSLGGIV NTNFATYAST
GLVDPGTGTQ LPNPYAITAA SLVAPSGGLA GAFAGSATFG PVLFNTITGT SEFQAMVDAA
NTAGYEPGSP EYAALVQQVY AGFIPTFAFA IQTGVDSIDP VNHAGMLKAT GLPVHLIEVV
GDGNGNLPDQ VLPNSVEGFP LSGTEPLIAN LGLECRDTTA QGGGAVRFIK GHHSSIVDPS
ENGATDGKAA ASTAEMQWQV AGFAKSAAAG TATILVNDAS VLKACD
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