Gene Sama_2115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2115 
Symbol 
ID4604365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2556975 
End bp2557820 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content57% 
IMG OID639781500 
Producthypothetical protein 
Protein accessionYP_927990 
Protein GI119775250 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0676] Uncharacterized enzymes related to aldose 1-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGG TGAGCAACAA AAAACATCCC CAGGGACTCG ATTACATTGA AGTCAGTACC 
GCACTTTGCA AGGCGCGAAT TTTTCTGCAG GGCGCCCAGA TAGACTTCTT CCAACCCACG
GGGAAACCGC CTTTGCTTTG GGTCTCTGAA GCCGATGATT ACCTCCCCGG CAGCGGTATC
CGTGGAGGAG TACCTGTTTG CTGGCCCTGG TTTGGCATGC ACAGCAATCC GGCGTTTCCC
CAGCACGGCT TTGCCCGCAC CCGTCTGTGG CATCTTAAGC ACAGCCATAT TCATAATGAA
GAAGTCGAGC TGGTATTTGG CCTTGAGATA GCGGTGGACG ACCGCCAGTT TTGGCCCCAT
AACACCGAGG TCGAAGTCCA TTTTCGTCTC ACTGACACCC TGGCCGTTTC TCTGGTAAAC
CGCAACCTGG GCGACAGCCA TGTCAGCCTC ACTCAGGCGC TGCACAGCTA TTTCCCCATC
ACTGATATAC ACGCGCTCAG TGCCAGGGGC TTCAGTGGCG CCAAGTACAT CGAGTTCGGT
GAAGGTCCCT ATGCTCAGGA AGGCGATGAG GTCGGGTTCG ACCGTGAAAC CGACAGGGTC
TACACCGACC TTGGCCCCTG CCAGACCCTG CACACGCCGG ACGGCGTGAT TGAGGTCAGC
CGTGAGCATA GCCAGTCGGC CGTACTCTGG AATCCGTGGA TTGATAAGTC ACAGCGCTTG
GCTCGTTTCA GGGATGAAGA CTACCTCACC ATGGTGTGCC TGGAAGCTGC CAATGTACTG
GAAGACAAAG TAGAGCTGGC CCCAGGTCAA ACCCATACCC TCACGACCCA TATCCGTTGG
CGCTGA
 
Protein sequence
MASVSNKKHP QGLDYIEVST ALCKARIFLQ GAQIDFFQPT GKPPLLWVSE ADDYLPGSGI 
RGGVPVCWPW FGMHSNPAFP QHGFARTRLW HLKHSHIHNE EVELVFGLEI AVDDRQFWPH
NTEVEVHFRL TDTLAVSLVN RNLGDSHVSL TQALHSYFPI TDIHALSARG FSGAKYIEFG
EGPYAQEGDE VGFDRETDRV YTDLGPCQTL HTPDGVIEVS REHSQSAVLW NPWIDKSQRL
ARFRDEDYLT MVCLEAANVL EDKVELAPGQ THTLTTHIRW R