Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2115 |
Symbol | |
ID | 4604365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2556975 |
End bp | 2557820 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639781500 |
Product | hypothetical protein |
Protein accession | YP_927990 |
Protein GI | 119775250 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCGG TGAGCAACAA AAAACATCCC CAGGGACTCG ATTACATTGA AGTCAGTACC GCACTTTGCA AGGCGCGAAT TTTTCTGCAG GGCGCCCAGA TAGACTTCTT CCAACCCACG GGGAAACCGC CTTTGCTTTG GGTCTCTGAA GCCGATGATT ACCTCCCCGG CAGCGGTATC CGTGGAGGAG TACCTGTTTG CTGGCCCTGG TTTGGCATGC ACAGCAATCC GGCGTTTCCC CAGCACGGCT TTGCCCGCAC CCGTCTGTGG CATCTTAAGC ACAGCCATAT TCATAATGAA GAAGTCGAGC TGGTATTTGG CCTTGAGATA GCGGTGGACG ACCGCCAGTT TTGGCCCCAT AACACCGAGG TCGAAGTCCA TTTTCGTCTC ACTGACACCC TGGCCGTTTC TCTGGTAAAC CGCAACCTGG GCGACAGCCA TGTCAGCCTC ACTCAGGCGC TGCACAGCTA TTTCCCCATC ACTGATATAC ACGCGCTCAG TGCCAGGGGC TTCAGTGGCG CCAAGTACAT CGAGTTCGGT GAAGGTCCCT ATGCTCAGGA AGGCGATGAG GTCGGGTTCG ACCGTGAAAC CGACAGGGTC TACACCGACC TTGGCCCCTG CCAGACCCTG CACACGCCGG ACGGCGTGAT TGAGGTCAGC CGTGAGCATA GCCAGTCGGC CGTACTCTGG AATCCGTGGA TTGATAAGTC ACAGCGCTTG GCTCGTTTCA GGGATGAAGA CTACCTCACC ATGGTGTGCC TGGAAGCTGC CAATGTACTG GAAGACAAAG TAGAGCTGGC CCCAGGTCAA ACCCATACCC TCACGACCCA TATCCGTTGG CGCTGA
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Protein sequence | MASVSNKKHP QGLDYIEVST ALCKARIFLQ GAQIDFFQPT GKPPLLWVSE ADDYLPGSGI RGGVPVCWPW FGMHSNPAFP QHGFARTRLW HLKHSHIHNE EVELVFGLEI AVDDRQFWPH NTEVEVHFRL TDTLAVSLVN RNLGDSHVSL TQALHSYFPI TDIHALSARG FSGAKYIEFG EGPYAQEGDE VGFDRETDRV YTDLGPCQTL HTPDGVIEVS REHSQSAVLW NPWIDKSQRL ARFRDEDYLT MVCLEAANVL EDKVELAPGQ THTLTTHIRW R
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