Gene Sama_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2104 
Symbol 
ID4604354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2548556 
End bp2548903 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content48% 
IMG OID639781489 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_927979 
Protein GI119775239 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.73063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA TAAATACCAT TAACTATTTG GAAATTCCCT GCAGTAAGTT GGCTGAAACC 
AAGGCATTTT TCAGTGCAGT ATTTGGCTGG GACTTTCTTG ATTACGGTCC TGAATACAGC
TGCTTTTTGG ATGCAGGTAT CGACGGTGGC TTTTATCTGG CCGACATAAG CTTCAGTGCT
GCGGCAGGAC CACTGTTGGT TCTTTACAGT GATGATTTAG CGGCGAAACA GGAGCAAATC
ATGCACCAGG GTGGCCGTAT AGTCCGGTCC GTCTTCAGCT TTCCCGGTGG TCGACGTTTT
CACTTTGCCT GTCCCAGTGG CAATGAATAT GCCGTCTGGT CTGAATAG
 
Protein sequence
MNRINTINYL EIPCSKLAET KAFFSAVFGW DFLDYGPEYS CFLDAGIDGG FYLADISFSA 
AAGPLLVLYS DDLAAKQEQI MHQGGRIVRS VFSFPGGRRF HFACPSGNEY AVWSE