| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2101 |
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| Symbol | asnB |
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| ID | 4604351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2546210 |
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| End bp | 2547874 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781486 |
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| Product | asparagine synthetase B |
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| Protein accession | YP_927976 |
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| Protein GI | 119775236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
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| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.550051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTCGA TATTTGCCAT TCTCGATATC CAGTCTGATG CCAGCGCCAT GCGCCAGGTT
GCCCTGGAAA TGTCCAAATT ATTGCGTCAC CGCGGCCCCG ACTGGTCAGG TATTTACGCC
GACGACCACG CTGTGCTGGC CCACGAGCGC CTTGCAATTG TTGACATAGA GCACGGTGCC
CAGCCGCTTA TCAGTGACGA TGGCAGCCTG GTACTGGCAG TGAATGGGGA AATCTACAAC
CACAAAGAAC TCAAGGCAGA GCTTGGCGAC AAGTACAGTT ACCAGACCAA CAGCGACTGC
GAAGTGATCC TGGCACTGTA CCAGGAATAC GGCAGCGACT TTCTCGACAA GCTCAACGGC
ATCTTCGCAT TTGTACTGTA CGACAAAGCC AAGGGCACGT ATCTGATTGG CCGCGACCAT
ATTGGCATCA TTCCACTCTA CACCGGCCGT GACGCCAAGG GTAACTTCTA TGTGGCGTCC
GAAATGAAGG CATTGGTGCC GGTTTGTAAA ACCGTCGAAA CCTTTGCCCC CGGTCATTAT
CTGTCAAGCA CCGACGCGCA GCCCGTTCGT TACTACCAGC GCGACTGGCA AGCTTTTGAC
GCTGTGGTCG ACAACGAGGC CAGCGTGGAA GAACTGCGCG GTGCACTCGA AGCCGCCGTG
AAGCGCCAGT TGATGTCAGA TGTGCCCTAT GGTGTGTTGC TGTCCGGCGG TTTGGACTCA
TCCATCGTGT CGGCCATCAC CCAAACCTTT GCCAAGCGTC GTATTGAAGA CAACGATGAA
AGTGAAGCCT GGTGGCCCCA GCTGCACTCC TTTGCCGTGG GTCTCAAAGG CTCGCCCGAC
TTGGCCGCAT CACGCAAGGT AGCCGATGCC ATTGGCACCA TACACCATGA AATCCACTTT
ACCTTCCAGG AAGGGCTGGA TGCCATCAAG GACGTGATTT ATCACCTGGA GACCTATGAT
GTCACCACCA TACGCGCGGC CACACCTATG TACCTGATGG CCCGTAAAAT CAAGGCTATG
GGTATCAAGA TGGTCCTGTC TGGCGAAGGC GCTGATGAGC TGTTTGGCGG TTACCTGTAT
TTCCATAAGG CGCCTAACCC TCAGGCGTTC CACGAAGAGC TGGTGCGTAA ACTCGACAAG
CTGCACCTGT TCGATTGCCT GCGCGCCAAC AAGGCCATGG CAGCCTGGGG CCTGGAAGCG
CGTGTGCCTT TCCTCGATAA AGAATTTATG GATGTGGCGA TGCGCTTAAA CCCGGCCGCC
AAGATGTCCG GTAAGGGCAA AATCGAGAAG CACATTCTGC GGGAAGCCTT CGAACACAAG
TTACCGGCCG AAATCGCCTG GCGTCAGAAA GAACAGTTCA GCGATGGCGT AGGTTACAGC
TGGATTGATG GTCTCAAGGA GCAAGCCGCG GCTCAGGTGG ACGATTTGCA GCTGGCCAAT
GCCCGTTTCC GCTTCCCGCA CAACACGCCG GAAACCAAGG AGGCCTATTT CTACCGCTGC
TTCTTTGAAG AGTTGTTCCC GCTGGAGTCT GCGGCCCTTA CCGTACCGGG TGGCAAGAGT
GTGGCCTGCT CGACGCCTGA GGCGCTTGCC TGGGATGCCA GCCTGCAGGG TATTATCGAC
CCCTCCGGCC GAGCAGTGCG GGAAGTACAC GCCCAAAGCT ACTGA
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| Protein sequence | MCSIFAILDI QSDASAMRQV ALEMSKLLRH RGPDWSGIYA DDHAVLAHER LAIVDIEHGA
QPLISDDGSL VLAVNGEIYN HKELKAELGD KYSYQTNSDC EVILALYQEY GSDFLDKLNG
IFAFVLYDKA KGTYLIGRDH IGIIPLYTGR DAKGNFYVAS EMKALVPVCK TVETFAPGHY
LSSTDAQPVR YYQRDWQAFD AVVDNEASVE ELRGALEAAV KRQLMSDVPY GVLLSGGLDS
SIVSAITQTF AKRRIEDNDE SEAWWPQLHS FAVGLKGSPD LAASRKVADA IGTIHHEIHF
TFQEGLDAIK DVIYHLETYD VTTIRAATPM YLMARKIKAM GIKMVLSGEG ADELFGGYLY
FHKAPNPQAF HEELVRKLDK LHLFDCLRAN KAMAAWGLEA RVPFLDKEFM DVAMRLNPAA
KMSGKGKIEK HILREAFEHK LPAEIAWRQK EQFSDGVGYS WIDGLKEQAA AQVDDLQLAN
ARFRFPHNTP ETKEAYFYRC FFEELFPLES AALTVPGGKS VACSTPEALA WDASLQGIID
PSGRAVREVH AQSY
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