| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2092 |
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| Symbol | |
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| ID | 4604342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2536350 |
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| End bp | 2537219 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781477 |
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| Product | OmpA/MotB |
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| Protein accession | YP_927967 |
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| Protein GI | 119775227 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000014464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGTA ACTGCTTTAT TCTATCTGCA CTGCTGCTGC CCCTGGGCGC GGCGGCCGAC
ATGCGTCACT ACGTGGCCAG CATTGCCGAC TCCCAGTGGC GCCTGGCTGA GAACTCCCGT
ATTCGCTGCA GTTTGGAGCA TGATATTCCG GCTTACGGCA AGGCGGTGTT TTCCAGTGCT
GCGGGGAAAG ATCAGAATCT ACTGTTTACC CTGGATATGT GGTCAAAGCC TGATGCAGCG
ACGGCGGCAA CTCTGGTGAG TAAAGCGCCC TCCTGGCGCC CCGGCGAAGT TCAGTCCACC
ATTACCAGGC TCTCATATAT GAGAGACTTT AACGGGGAAG TACCCAAAAA GGCCGCCTGG
TCCATGCTGA CCGAGCTTGA GCGGGGACGT GAGCCTACTT TCTATTATGC CGACTGGTAC
AACAGCAACA ATAAGGTTGC CGTGGGTCTG TCGGCCGCCA ATTTCCGCCG CAAGTACACA
GAATTCCGTC AGTGTCTTTC AGGCCTGCTG CCATACAGTT TCGATGATAT TGCCTTTACG
GTGCTCAATT ATGAGTCGGG CGGAACTGAA CTGACCCGCT TTTCCAAGGC GCAGCTGGCA
CGGGTGCAGG AATACCTGAG CCTGGATCCC GATGTTGAGC TTATCCTTAT CAATGCCTAT
ACCGACAGCC ATGGCGGCCG TAACCTGAAT CAAAAGGTGT CTGACAAGCG CGCTGATTCA
GTGAAGGACT TTTTTGTCAG TAAAGGCATC CCCGCTGACC GAATCCAGAC AGAAGGTCAT
GGGGAAACGC GTCACGTGGC ATCCAATCAG GGGGCCGACG AGCGCCAGCG AAACCGCCGG
GTGGTTATCC AGATAACCAA AGCTATTTGA
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| Protein sequence | MWRNCFILSA LLLPLGAAAD MRHYVASIAD SQWRLAENSR IRCSLEHDIP AYGKAVFSSA
AGKDQNLLFT LDMWSKPDAA TAATLVSKAP SWRPGEVQST ITRLSYMRDF NGEVPKKAAW
SMLTELERGR EPTFYYADWY NSNNKVAVGL SAANFRRKYT EFRQCLSGLL PYSFDDIAFT
VLNYESGGTE LTRFSKAQLA RVQEYLSLDP DVELILINAY TDSHGGRNLN QKVSDKRADS
VKDFFVSKGI PADRIQTEGH GETRHVASNQ GADERQRNRR VVIQITKAI
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